RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 ZNF215Q9UL58 517 aaPredicted RBP13.16□□□□□ -0.3
COL25A1-202ENST00000399127 ATRNL1Q5VV63 1379 aa13.16□□□□□ -0.3
COL25A1-202ENST00000399127 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 H7C1D1 291 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 IDEP14735 1019 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 MIGA2Q7L4E1 593 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 FEZ1Q99689 392 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 ANO3Q9BYT9 981 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 GJA3Q9Y6H8 435 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 LRRC10BA6NIK2 292 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 MEIS2O14770 477 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 FANCGO15287 622 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 MFAP3LO75121 409 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 BMP3P12645 472 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
COL25A1-202ENST00000399127 AMPD3Q01432 767 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 SPAG1Q07617 926 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 NCBP1Q09161 790 aaKnown RBP13.15□□□□□ -0.3
COL25A1-202ENST00000399127 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
COL25A1-202ENST00000399127 TTI2Q6NXR4 508 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 CSGALNACT2Q8N6G5 542 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 KIAA0895Q8NCT3 520 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 CCDC47Q96A33 483 aaKnown RBP13.15□□□□□ -0.3
COL25A1-202ENST00000399127 TMEM39BQ9GZU3 492 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 YY1AP1Q9H869 796 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 SPON1Q9HCB6 807 aa13.15□□□□□ -0.3
COL25A1-202ENST00000399127 ZNF70Q9UC06 446 aaPredicted RBP13.15□□□□□ -0.3
COL25A1-202ENST00000399127 KIF2AO00139 706 aaPredicted RBP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 SSBP05455 408 aaKnown RBP eCLIP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 STAT3P40763 770 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ETF1P62495 437 aaKnown RBP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 PDIA5Q14554 519 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 SYDE2Q5VT97 1194 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ANKRD40Q6AI12 368 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 TRIM65Q6PJ69 517 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 GMCL1P1Q8NEA9 526 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 AGBL3Q8NEM8 1001 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 AMNQ9BXJ7 453 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 GEMIN8Q9NWZ8 242 aaKnown RBP13.14□□□□□ -0.31
COL25A1-202ENST00000399127 OGFRQ9NZT2 677 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 SMCHD1A6NHR9 2005 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 A0A0U1RQJ8 604 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 CCP110O43303 1012 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 TNIP1Q15025 636 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 RAD9BQ6WBX8 426 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 RAD54LQ92698 747 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 P2RX5Q93086 422 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 PANX2Q96RD6 677 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ARFGEF1Q9Y6D6 1849 aa13.14□□□□□ -0.31
COL25A1-202ENST00000399127 ARHGAP27Q6ZUM4 889 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 CCDC84Q86UT8 332 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-202ENST00000399127 GLIS3Q8NEA6 775 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 GMCL1Q96IK5 515 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 B4DLN1 442 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 ERCC3P19447 782 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 RAD51AP2Q09MP3 1159 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 LRRC41Q15345 812 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 PRR16Q569H4 304 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 DDX12PQ92771 950 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-202ENST00000399127 MRPL44Q9H9J2 332 aaKnown RBP13.13□□□□□ -0.31
COL25A1-202ENST00000399127 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
COL25A1-202ENST00000399127 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 E9PMD0 336 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 CCNE1P24864 410 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 FAM83BQ5T0W9 1011 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-202ENST00000399127 LZTFL1Q9NQ48 299 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-202ENST00000399127 PRR12Q9ULL5 1215 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 KIAA1024Q9UPX6 916 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 POTECB2RU33 542 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 TPM1P09493 284 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
COL25A1-202ENST00000399127 PRELPP51888 382 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 GNG11P61952 73 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 CACNB1Q02641 598 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-202ENST00000399127 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 ANKRD7Q92527 254 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 WDR24Q96S15 920 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
COL25A1-202ENST00000399127 TSPYL1Q9H0U9 437 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 SEMA6BQ9H3T3 888 aa13.12□□□□□ -0.31
COL25A1-202ENST00000399127 THAP9Q9H5L6 903 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms