RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MTUS1Q9ULD2 1270 aa16■□□□□ 0.15
RPRD1A-202ENST00000399022 FAM205CA6NFA0 338 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 EIF4E1BA6NMX2 242 aaKnown RBP15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 LRRIQ3A6PVS8 624 aaPredicted RBP15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 SP4Q02446 784 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 VWA3BQ502W6 1294 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 ARMC2Q8NEN0 867 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 THOC1Q96FV9 657 aaKnown RBP15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 LONP1P36776 959 aaKnown RBP15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 TRIM65Q6PJ69 517 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 PLAAQ9Y263 795 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 ATP5DP30049 168 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 STX2P32856 288 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 ZBED6P86452 979 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 TAF11Q15544 211 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 ATP8A1Q9Y2Q0 1164 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 SEMA3EO15041 775 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 CETN3O15182 167 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 CTNNA2P26232 953 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 EEF1GP26641 437 aaKnown RBP15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 TCP11X2Q5H9J9 407 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 CROCCP2Q86T23 111 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 GBP5Q96PP8 586 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 CHP1Q99653 195 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 RAB17Q9H0T7 212 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 PRM3Q9NNZ6 103 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 PCDHA4Q9UN74 947 aa15.99■□□□□ 0.15
RPRD1A-202ENST00000399022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 BACH1O14867 736 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 EIF4A3P38919 411 aaKnown RBP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 FXR1P51114 621 aaKnown RBP eCLIP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 TBC1D9BQ66K14 1250 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 IGDCC4Q8TDY8 1250 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 MCUR1Q96AQ8 359 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 COA7Q96BR5 231 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 SMC6Q96SB8 1091 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 TRIM10Q9UDY6 481 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 XDHP47989 1333 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 KDM6AO15550 1401 aaPredicted RBP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 ZNF185O15231 689 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 CFBP00751 764 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 RSRC2Q7L4I2 434 aaKnown RBP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 TRIM4Q9C037 500 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 PPP1R37O75864 691 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 ATP2B4P23634 1241 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 SLC16A2P36021 539 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 ALX1Q15699 326 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 ARMC9Q7Z3E5 817 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 PIGSQ96S52 555 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 NOP53Q9NZM5 478 aaKnown RBP15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 PCDHA12Q9UN75 941 aa15.98■□□□□ 0.15
RPRD1A-202ENST00000399022 TTC26A0AVF1 554 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 GJC1P36383 396 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 DHX9Q08211 1270 aaKnown RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 CCNI2Q6ZMN8 369 aaPredicted RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 RWDD2AQ9UIY3 292 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 ATP6V0A2Q9Y487 856 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 IKBKGQ9Y6K9 419 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 GMNCA6NCL1 334 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 CCDC169A6NNP5 214 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 SEL1L2Q5TEA6 688 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 RASIP1Q5U651 963 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 GSTA5Q7RTV2 222 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 WHAMMQ8TF30 809 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 LRRC1Q9BTT6 524 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 EPB41L4AQ9HCS5 686 aaPredicted RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 DCP1AQ9NPI6 582 aaPredicted RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 POLR2FP61218 127 aaKnown RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 USP49Q70CQ1 688 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 RASGRP2Q7LDG7 609 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 IQCDQ96DY2 449 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 BICD1Q96G01 975 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 PSTPIP2Q9H939 334 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 TUBE1Q9UJT0 475 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 DDX39AO00148 427 aaKnown RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 FLOT1O75955 427 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 SUN1O94901 812 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 SEC24CP53992 1094 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 NBPF9Q3BBW0 867 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 MB21D1Q8N884 522 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 TBCKQ8TEA7 893 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 TEKT1Q969V4 418 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 HVCN1Q96D96 273 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 FAM84BQ96KN1 310 aaPredicted RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 FAM167BQ9BTA0 163 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 LSM14BQ9BX40 385 aaKnown RBP15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 HPS5Q9UPZ3 1129 aa15.97■□□□□ 0.15
RPRD1A-202ENST00000399022 TRAPPC10P48553 1259 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 POLE2P56282 527 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 CCT8L2Q96SF2 557 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms