RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 ZNF711Q9Y462 761 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ANKARQ7Z5J8 1434 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 TNKSO95271 1327 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 UBR1Q8IWV7 1749 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 IFT172Q9UG01 1749 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 TEX33O43247 280 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 KRT5P13647 590 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 TMOD1P28289 359 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ARL1P40616 181 aaPredicted RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 MAP7Q14244 749 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 TMEM154Q6P9G4 183 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 INTS8Q75QN2 995 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 FAM81AQ8TBF8 368 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 DLGAP2Q9P1A6 1054 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 C15orf41Q9Y2V0 281 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 THRAP3Q9Y2W1 955 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 CEP104O60308 925 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 SORBS3O60504 671 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 HEXIM1O94992 359 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 FAM107AO95990 144 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 ATP2A2P16615 1042 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 PAK1Q13153 545 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 PDE1CQ14123 709 aaPredicted RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 GPR162Q16538 588 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 NIM1KQ8IY84 436 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 LRRC47Q8N1G4 583 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 PIGBQ92521 554 aa10.18□□□□□ -0.78
CDH23-203ENST00000398788 LBHD1Q9BQE6 289 aaPredicted RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 SETD1BQ9UPS6 1966 aaKnown RBP10.18□□□□□ -0.78
CDH23-203ENST00000398788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 RPL13P26373 211 aaKnown RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 PLCB4Q15147 1175 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 MFN1Q8IWA4 741 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 FANCBQ8NB91 859 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 SEC16BQ96JE7 1060 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 DSCC1Q9BVC3 393 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 KCND1Q9NSA2 647 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 PCDHB13Q9Y5F0 798 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 MAST3O60307 1309 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 AOX1Q06278 1338 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 FRMPD2Q68DX3 1309 aaPredicted RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 CEP170BQ9Y4F5 1589 aaPredicted RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 A0A0U1RQJ8 604 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 A0A1W2PQ27 194 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 A0A1W2PQ64 194 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 A0A1W2PQD8 194 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 SMCO2A6NFE2 343 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 CDC25AP30304 524 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 MAGEA1P43355 309 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 C2CD5Q86YS7 1000 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 KIF2BQ8N4N8 673 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 LINC00301Q8NCQ3 95 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 CNKSR1Q969H4 720 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 MPHOSPH6Q99547 160 aaKnown RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 DDX23Q9BUQ8 820 aaKnown RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 USP40Q9NVE5 1235 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 CMA1P23946 247 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 GRAMD1CQ8IYS0 662 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 REXO1Q8N1G1 1221 aaKnown RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 UHMK1Q8TAS1 419 aaKnown RBP10.17□□□□□ -0.78
CDH23-203ENST00000398788 PANX2Q96RD6 677 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 FNBP1Q96RU3 617 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 LRRC1Q9BTT6 524 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 AFF2P51816 1311 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 TRPM1Q7Z4N2 1603 aa10.17□□□□□ -0.78
CDH23-203ENST00000398788 ARHGEF35A5YM69 484 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 SPOPO43791 374 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 WDR93Q6P2C0 686 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 FAM47EQ6ZV65 393 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 PNMA1Q8ND90 353 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 LRRC45Q96CN5 670 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 ZIM3Q96PE6 472 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 DNAI2Q9GZS0 605 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 IQCGQ9H095 443 aaKnown RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 GPHNQ9NQX3 736 aaPredicted RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 STAP2Q9UGK3 403 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 PAIP2BQ9ULR5 123 aaKnown RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 PLAAQ9Y263 795 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 FRMD4BQ9Y2L6 1034 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 PDE8BO95263 885 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 CHRNDQ07001 517 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 SETDB1Q15047 1291 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 CCDC92Q53HC0 331 aaPredicted RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 MMADHCQ9H3L0 296 aaPredicted RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 PRKAB2O43741 272 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 TECP42680 631 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 RAD23BP54727 409 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 CYP27A1Q02318 531 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 CABP7Q86V35 215 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 CERKQ8TCT0 537 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 RASGRP4Q8TDF6 673 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 HAUS7Q99871 368 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 SLC39A2Q9NP94 309 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 RTEL1Q9NZ71 1219 aa10.16□□□□□ -0.78
CDH23-203ENST00000398788 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.16□□□□□ -0.78
CDH23-203ENST00000398788 HMGB1P1B2RPK0 211 aaPredicted RBP10.16□□□□□ -0.78
CDH23-203ENST00000398788 CYP27B1O15528 508 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms