RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 CYP2C18P33260 490 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 NKX3-2P78367 333 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 PPIGQ13427 754 aaKnown RBP eCLIP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 BAATQ14032 418 aaPredicted RBP11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 AMHR2Q16671 573 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 TMEM240Q5SV17 173 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 BTNL9Q6UXG8 535 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 RILPL2Q969X0 211 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 AP5M1Q9H0R1 490 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 GBF1Q92538 1859 aa11.55□□□□□ -0.56
NIFKP1-201ENST00000398317 PTPDC1A2A3K4 754 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 NFIBO00712 420 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 CD4P01730 458 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 PSMC6P62333 389 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 ITGA7Q13683 1181 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 GRIN2CQ14957 1233 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 IQSEC1Q6DN90 963 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 PARP9Q8IXQ6 854 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 TMEM199Q8N511 208 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 HLA-CQ95604 372 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 TCP11L1Q9NUJ3 509 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 UMODL1Q5DID0 1318 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 CCDC171Q6TFL3 1326 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 CHD7Q9P2D1 2997 aa11.54□□□□□ -0.56
NIFKP1-201ENST00000398317 MYH6P13533 1939 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 ZEB2O60315 1214 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 PDHBP11177 359 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 CALML3P27482 149 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 ALDH5A1P51649 535 aaPredicted RBP11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 MFSD6Q6ZSS7 791 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 TBC1D10CQ8IV04 446 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 SLC43A3Q8NBI5 491 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 MORC4Q8TE76 937 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 TIFAQ96CG3 184 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 ZKSCAN3Q9BRR0 538 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 TRPV6Q9H1D0 765 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 ZNF576Q9H609 170 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 VTA1Q9NP79 307 aa11.53□□□□□ -0.56
NIFKP1-201ENST00000398317 TTC28Q96AY4 2481 aa11.52□□□□□ -0.56
NIFKP1-201ENST00000398317 TMEM265A0A087WTH1 108 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 B4GALT4O60513 344 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 CABYRO75952 493 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 SSTR3P32745 418 aaPredicted RBP11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 CCL23P55773 120 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 ZNF543Q08ER8 600 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 SLC30A10Q6XR72 485 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 CLEC4DQ8WXI8 215 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 IL23AQ9NPF7 189 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 ADD3Q9UEY8 706 aaKnown RBP11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 Q9Y3F1 56 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 NEDD4P46934 1319 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 SCN5AQ14524 2016 aa11.52□□□□□ -0.57
NIFKP1-201ENST00000398317 TRIP12Q14669 1992 aaPredicted RBP11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 GOLGA8HP0CJ92 632 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 SDSP20132 328 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 PDE4DQ08499 809 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 DUSP28Q4G0W2 176 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 RASIP1Q5U651 963 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 PSRC1Q6PGN9 363 aaPredicted RBP11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 RNF207Q6ZRF8 634 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 PPP1R13LQ8WUF5 828 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 YTHDC1Q96MU7 727 aaKnown RBP11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 PBX4Q9BYU1 374 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 UBA5Q9GZZ9 404 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 CXXC1Q9P0U4 656 aaPredicted RBP11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 REV3LO60673 3130 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 ZMYM6O95789 1325 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 LAMA4Q16363 1823 aa11.51□□□□□ -0.57
NIFKP1-201ENST00000398317 SCN10AQ9Y5Y9 1956 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 IGHDP01880 384 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 MYL3P08590 195 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 SNHG28P0DPA3 235 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 RPS6P62753 249 aaKnown RBP11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 USH1GQ495M9 461 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 CWC27Q6UX04 472 aaKnown RBP11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 OTOP2Q7RTS6 562 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 CHD1LQ86WJ1 897 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 TICAM2Q86XR7 235 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 PLEKHM2Q8IWE5 1019 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 SMC5Q8IY18 1101 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 USP38Q8NB14 1042 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 OR6J1Q8NGC5 347 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 HERVK_113Q902F9 699 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 COPS5Q92905 334 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 TTC14Q96N46 770 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 NOC4LQ9BVI4 516 aaKnown RBP11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 TRMT13Q9NUP7 481 aaKnown RBP11.5□□□□□ -0.57
NIFKP1-201ENST00000398317 MYH7BA7E2Y1 1941 aa11.49□□□□□ -0.57
NIFKP1-201ENST00000398317 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
NIFKP1-201ENST00000398317 ZNF213O14771 459 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms