RNA–Protein interactions for RNA: ENST00000398138.4

RDH16-202, Transcript of retinol dehydrogenase 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDH16, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-202ENST00000398138 PCDHA12Q9UN75 941 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 ZRANB2O95218 330 aaKnown RBP eCLIP14.26□□□□□ -0.13
RDH16-202ENST00000398138 ZBED6P86452 979 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 DMTNQ08495 405 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 TUBB2AQ13885 445 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
RDH16-202ENST00000398138 SH3BP5LQ7L8J4 393 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 MKL1Q969V6 931 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 TUBB2BQ9BVA1 445 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 IDI2Q9BXS1 227 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 GLT8D2Q9H1C3 349 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 ZNHIT6Q9NWK9 470 aaKnown RBP14.26□□□□□ -0.13
RDH16-202ENST00000398138 NYAP2Q9P242 653 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 TRIM10Q9UDY6 481 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 SCN9AQ15858 1988 aa14.26□□□□□ -0.13
RDH16-202ENST00000398138 SEC31AO94979 1220 aaKnown RBP14.25□□□□□ -0.13
RDH16-202ENST00000398138 PNMA6AP0CW24 399 aaPredicted RBP14.25□□□□□ -0.13
RDH16-202ENST00000398138 ICA1Q05084 483 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 SEPT2Q15019 361 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 UIMC1Q96RL1 719 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 NAP1L4Q99733 375 aaKnown RBP14.25□□□□□ -0.13
RDH16-202ENST00000398138 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 HERVK_113P62684 666 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 FKBP1AP62942 108 aaKnown RBP14.25□□□□□ -0.13
RDH16-202ENST00000398138 PARD6BQ9BYG5 372 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 ANO3Q9BYT9 981 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
RDH16-202ENST00000398138 GOLGB1Q14789 3259 aaKnown RBP14.25□□□□□ -0.13
RDH16-202ENST00000398138 GDF11O95390 407 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
RDH16-202ENST00000398138 CYLC1P35663 651 aaPredicted RBP14.24□□□□□ -0.13
RDH16-202ENST00000398138 HDLBPQ00341 1268 aaKnown RBP14.24□□□□□ -0.13
RDH16-202ENST00000398138 LRRC63Q05C16 580 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 EHHADHQ08426 723 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 PSMD2Q13200 908 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 VWA3BQ502W6 1294 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 GLIS3Q8NEA6 775 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 HAUS4Q9H6D7 363 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 A0A1W2PQJ5 194 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 H0YIN7 160 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 SSBP05455 408 aaKnown RBP eCLIP14.24□□□□□ -0.13
RDH16-202ENST00000398138 KRT83P78385 493 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 COASYQ13057 564 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 LRRC41Q15345 812 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 FIGNQ5HY92 759 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 TATDN1Q6P1N9 297 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 NDST4Q9H3R1 872 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 NHEJ1Q9H9Q4 299 aaPredicted RBP14.24□□□□□ -0.13
RDH16-202ENST00000398138 TFR2Q9UP52 801 aa14.24□□□□□ -0.13
RDH16-202ENST00000398138 TFRCP02786 760 aaKnown RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 HOXA7P31268 230 aaPredicted RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 MAN2A1Q16706 1144 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 HYIQ5T013 277 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 CCDC122Q5T0U0 273 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 CC2D1AQ6P1N0 951 aaPredicted RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 KIAA1328Q86T90 577 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 DNAJC19Q96DA6 116 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 TSG101Q99816 390 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 SERPINA10Q9UK55 444 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 IPO7O95373 1038 aaKnown RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 USP11P51784 963 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 SNAP25P60880 206 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 GABPB1Q06547 395 aaPredicted RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 AOC3Q16853 763 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 ABCB5Q2M3G0 1257 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 STYK1Q6J9G0 422 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 LRRC55Q6ZSA7 311 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 SIAH1Q8IUQ4 282 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 CCDC170Q8IYT3 715 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 MYOCDQ8IZQ8 938 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 IQCDQ96DY2 449 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 PANK4Q9NVE7 773 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 KIAA1024Q9UPX6 916 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 ABCB11O95342 1321 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 ZNF646O15015 1829 aaPredicted RBP14.23□□□□□ -0.13
RDH16-202ENST00000398138 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
RDH16-202ENST00000398138 POTEB3A0JP26 581 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 POTECB2RU33 542 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 E9PMD0 336 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 F5H6K3 240 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 KLRC3Q07444 240 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 IKQ13123 557 aaPredicted RBP14.22□□□□□ -0.13
RDH16-202ENST00000398138 WHAMMP3Q1A5X7 153 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 UTP14CQ5TAP6 766 aaKnown RBP14.22□□□□□ -0.13
RDH16-202ENST00000398138 POTEBQ6S5H4 581 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 JAKMIP2Q96AA8 810 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 ST7Q9NRC1 585 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 FAM207AQ9NSI2 230 aaPredicted RBP14.22□□□□□ -0.13
RDH16-202ENST00000398138 BMP2KQ9NSY1 1161 aaPredicted RBP14.22□□□□□ -0.13
RDH16-202ENST00000398138 MEIS2O14770 477 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
RDH16-202ENST00000398138 ERCC3P19447 782 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 AMPD2Q01433 879 aa14.22□□□□□ -0.13
RDH16-202ENST00000398138 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms