RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RTL10Q7L3V2 364 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 MILR1Q7Z6M3 343 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 CCNJLQ8IV13 435 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 ADAMTS18Q8TE60 1221 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 AFAP1L1Q8TED9 768 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 KIAA1191Q96A73 305 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 TRIM44Q96DX7 344 aaPredicted RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 HSH2DQ96JZ2 352 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 TTLL2Q9BWV7 592 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 GSX2Q9BZM3 304 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 GGA3Q9NZ52 723 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 RTEL1Q9NZ71 1219 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 NFKBIL1Q9UBC1 381 aaPredicted RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 B4E171 279 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 PRODHO43272 600 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 FKBP9O95302 570 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 FGFR1P11362 822 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 MTHFD1P11586 935 aaKnown RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 IL2P60568 153 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 PKN2Q16513 984 aaKnown RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 LRRFIP1Q32MZ4 808 aaKnown RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 CCDC158Q5M9N0 1113 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 NSMFQ6X4W1 530 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 FKBP9P1Q75LS8 142 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 OVCH2Q7RTZ1 564 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 PTRH1Q86Y79 214 aaKnown RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 ZSCAN18Q8TBC5 510 aaPredicted RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 RMDN3Q96TC7 470 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 LGR4Q9BXB1 951 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 ELAC1Q9H777 363 aaKnown RBP7.82□□□□□ -1.16
SMCO1-201ENST00000397537 DBNDD1Q9H9R9 158 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 ITM2CQ9NQX7 267 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 MARK1Q9P0L2 795 aa7.82□□□□□ -1.16
SMCO1-201ENST00000397537 KIF27Q86VH2 1401 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 TCRBV16S1A1N1A0A5B0 115 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 FAM86C2PA6NEL3 165 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 TRIM64A6NGJ6 449 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 TRIM64BA6NI03 449 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 TK2O00142 265 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 MAFKO60675 156 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 DDX58O95786 925 aaKnown RBP7.81□□□□□ -1.16
SMCO1-201ENST00000397537 KCNA2P16389 499 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 SLC7A5Q01650 507 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 CCDC38Q502W7 563 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 CCDC30Q5VVM6 783 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 NBPF10Q6P3W6 841 aaKnown RBP7.81□□□□□ -1.16
SMCO1-201ENST00000397537 TMCO3Q6UWJ1 677 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 MRPL50Q8N5N7 158 aaKnown RBP7.81□□□□□ -1.16
SMCO1-201ENST00000397537 SMC1BQ8NDV3 1235 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 PPP1R16BQ96T49 567 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 ORAI3Q9BRQ5 295 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 ABCG4Q9H172 646 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 FAM204AQ9H8W3 233 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 ATP8A2Q9NTI2 1148 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 C14orf119Q9NWQ9 140 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 PPP1R9AQ9ULJ8 1098 aa7.81□□□□□ -1.16
SMCO1-201ENST00000397537 A0A087WV62 115 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 TISP43B9A030 160 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 B9A039 149 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CAPNS1P04632 268 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 BMP6P22004 513 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 PRIM2P49643 509 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 SIK1P57059 783 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 IFIT5Q13325 482 aaKnown RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 ENOSF1Q7L5Y1 443 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 MAP4K3Q8IVH8 894 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 SLC30A5Q8TAD4 765 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 RHPN1Q8TCX5 695 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 USP13Q92995 863 aaPredicted RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 GAL3ST3Q96A11 431 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CENPTQ96BT3 561 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 LRCH3Q96II8 777 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 WNK4Q96J92 1243 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CNTNAP3BQ96NU0 1288 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 MRPL9Q9BYD2 267 aaKnown RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CNTNAP3Q9BZ76 1288 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 BHMT2Q9H2M3 363 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 ZFYVE1Q9HBF4 777 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 EMC7Q9NPA0 242 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 MKS1Q9NXB0 559 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CFAP74Q9C0B2 1584 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 EIF3FO00303 357 aaPredicted RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 FRS3O43559 492 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 XPOTO43592 962 aaKnown RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 OFD1O75665 1012 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 SLITRK5O94991 958 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CFBP00751 764 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 FOSL1P15407 271 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 ITPKAP23677 461 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 PLIN5Q00G26 463 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 DSG1Q02413 1049 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 KIAA0753Q2KHM9 967 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 DGKKQ5KSL6 1271 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 UBE2R2Q712K3 238 aaPredicted RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 NRSN1Q8IZ57 195 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms