RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 CCDC122Q5T0U0 273 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 C12orf60Q5U649 245 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 YTHDF3Q7Z739 585 aaKnown RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 IRF2BP1Q8IU81 584 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 GLIS3Q8NEA6 775 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ZNF526Q8TF50 670 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 COG1Q8WTW3 980 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 RSRC1Q96IZ7 334 aaKnown RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 PANX2Q96RD6 677 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 RABEP2Q9H5N1 569 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 ATP6V0A4Q9HBG4 840 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 GPCPD1Q9NPB8 672 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 FAM207AQ9NSI2 230 aaPredicted RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 IRAK4Q9NWZ3 460 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 RWDD2AQ9UIY3 292 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 LUC7L2Q9Y383 392 aaKnown RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 RTCBQ9Y3I0 505 aaKnown RBP5.56□□□□□ -1.52
SSR1-202ENST00000397511 DOCK2Q92608 1830 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 BCL9LQ86UU0 1499 aa5.56□□□□□ -1.52
SSR1-202ENST00000397511 BCORQ6W2J9 1755 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 USP17L5A8MUK1 530 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 C6orf229H3BNL8 230 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SNUPNO95149 360 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 MYBL2P10244 700 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CXCR5P32302 372 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SLC8A1P32418 973 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SLC16A2P36021 539 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 PBX1P40424 430 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 BTDP43251 543 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MTIF2P46199 727 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 VASPP50552 380 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 PPP2R5BQ15173 497 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 PTPROQ16827 1216 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 TSR1Q2NL82 804 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 RNF187Q5TA31 235 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 ANKRD40Q6AI12 368 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CLEC4GQ6UXB4 293 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 C4orf32Q8N8J7 132 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MAGEC3Q8TD91 643 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 TBCKQ8TEA7 893 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CEP95Q96GE4 821 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 EYA3Q99504 573 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 VCPKMTQ9H867 229 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 JADE2Q9NQC1 790 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 BATF3Q9NR55 127 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MAGEC2Q9UBF1 373 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 EPN1Q9Y6I3 576 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 COL22A1Q8NFW1 1626 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 FAM196BA6NMK8 535 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 GOLGA8KD6RF30 607 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 UFL1O94874 794 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 NDUFA10O95299 355 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 ATP1A1P05023 1023 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 ATXN8OSP0DMR3 200 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 ARID5AQ03989 594 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 ZC3H12AQ5D1E8 599 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 CYP26C1Q6V0L0 522 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CABP7Q86V35 215 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 RIN2Q8WYP3 895 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 SAAL1Q96ER3 474 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 NAPGQ99747 312 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 TUBGCP2Q9BSJ2 902 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 TANGO6Q9C0B7 1094 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 LACRTQ9GZZ8 138 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 ZHX3Q9H4I2 956 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 TCP11L1Q9NUJ3 509 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SMARCAL1Q9NZC9 954 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 DDX20Q9UHI6 824 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 AHDC1Q5TGY3 1603 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 RCCD1A6NED2 376 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 ORC4O43929 436 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MARCH6O60337 910 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 RASSF9O75901 435 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 BMP15O95972 392 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CALML3P27482 149 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SCNN1DP51172 638 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 APBA1Q02410 837 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 DRP2Q13474 957 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 PDCD2Q16342 344 aaPredicted RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 UBE2SQ16763 222 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MFSD14BQ5SR56 506 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 FAM196AQ6ZSG2 479 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 PARP9Q8IXQ6 854 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MB21D1Q8N884 522 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 MICAL1Q8TDZ2 1067 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 NOC4LQ9BVI4 516 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 MMRN2Q9H8L6 949 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 KIF9Q9HAQ2 790 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 SLC40A1Q9NP59 571 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 REXO2Q9Y3B8 237 aaKnown RBP5.55□□□□□ -1.52
SSR1-202ENST00000397511 GRIN2DO15399 1336 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 NID2Q14112 1375 aa5.55□□□□□ -1.52
SSR1-202ENST00000397511 CENPFP49454 3210 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 SPATA31A5Q5VU36 1347 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 SPATA31A7Q8IWB4 1347 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 STXBP3O00186 592 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 PSMA7O14818 248 aa5.54□□□□□ -1.52
SSR1-202ENST00000397511 OPA1O60313 960 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms