RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 KBTBD4Q9NVX7 518 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 SMARCAL1Q9NZC9 954 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 TCEAL9Q9UHQ7 104 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 SAR1BQ9Y6B6 198 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 STRCQ7RTU9 1775 aa11.59□□□□□ -0.55
CPSF1P1-201ENST00000397477 PPIP5K2O43314 1243 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 RASSF7Q02833 373 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 KCTD19Q17RG1 926 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CSRNP1Q96S65 589 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 LSM14BQ9BX40 385 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 GTPBP4Q9BZE4 634 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 THAP9Q9H5L6 903 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 SAMM50Q9Y512 469 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CTDP1Q9Y5B0 961 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 MORC2Q9Y6X9 1032 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CICQ96RK0 1608 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 MYH3P11055 1940 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 ZBTB5O15062 677 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 MOCS3O95396 460 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 EIF4A3P38919 411 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 ABCB5Q2M3G0 1257 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 TTI2Q6NXR4 508 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CC2D1AQ6P1N0 951 aaPredicted RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 TPH2Q8IWU9 490 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CCDC65Q8IXS2 484 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CPXCR1Q8N123 301 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 RABGGTAQ92696 567 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 LACRTQ9GZZ8 138 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 PCDHB13Q9Y5F0 798 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 MYH7P12883 1935 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 POLRMTO00411 1230 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CLIC2O15247 247 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 KLRC4O43908 158 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 TBCAO75347 108 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 IL1R1P14778 569 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 CERS3Q8IU89 383 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 SP8Q8IXZ3 490 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 KIAA0895Q8NCT3 520 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 DUSP9Q99956 384 aaKnown RBP11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 ATP6V0A2Q9Y487 856 aa11.58□□□□□ -0.56
CPSF1P1-201ENST00000397477 MYH13Q9UKX3 1938 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 TACC1O75410 805 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 DNAJC21Q5F1R6 531 aaKnown RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 COL23A1Q86Y22 540 aaPredicted RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 PIGOQ8TEQ8 1089 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 CENPHQ9H3R5 247 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 SEMA6BQ9H3T3 888 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 BCS1LQ9Y276 419 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 NID2Q14112 1375 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 C21orf2O43822 256 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 PLA2G4BP0C869 781 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 ANO3Q9BYT9 981 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 LRRC53A6NM62 1247 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 TMCO5BA8MYB1 307 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 F5H6K3 240 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 NCK2O43639 380 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 GCNT3O95395 438 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 H2AFXP16104 143 aaPredicted RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 ADRA2BP18089 450 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 PDE6BP35913 854 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 KLRC3Q07444 240 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 C2orf54Q08AI8 447 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 ADAM9Q13443 819 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 CT47A1Q5JQC4 288 aaPredicted RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 GPATCH4Q5T3I0 446 aaKnown RBP11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 FBXO11Q86XK2 927 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 RAD54LQ92698 747 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 HAUS4Q9H6D7 363 aa11.57□□□□□ -0.56
CPSF1P1-201ENST00000397477 EP400Q96L91 3159 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 PRPF6O94906 941 aaKnown RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 NPR1P16066 1061 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 KCNB1Q14721 858 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 PNKPQ96T60 521 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 SH2D3AQ9BRG2 576 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 FHOD1Q9Y613 1164 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 BCL9LQ86UU0 1499 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 ECE2O60344 883 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 SHMT1P34896 483 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 USP8P40818 1118 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 VSNL1P62760 191 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 ZBED6P86452 979 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 SP4Q02446 784 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 GFPT1Q06210 699 aaPredicted RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 TERF2Q15554 542 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 UNC13DQ70J99 1090 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 MMTAG2Q9BU76 263 aaKnown RBP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 SHANK3Q9BYB0 1731 aa11.56□□□□□ -0.56
CPSF1P1-201ENST00000397477 SLC7A5Q01650 507 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms