RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 NOP14P78316 857 aaKnown RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 CDKL2Q92772 493 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 SNX21Q969T3 373 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 TPCN1Q9ULQ1 816 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 KDM2BQ8NHM5 1336 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 LRRN2O75325 713 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 TEX2Q8IWB9 1127 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 ZNF668Q96K58 619 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 CLIC6Q96NY7 704 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 MFSD14CQ5VZR4 134 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 CCDC84Q86UT8 332 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-208ENST00000397030 PGBD3Q8N328 593 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 YIPF2Q9BWQ6 316 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 TRIM35Q9UPQ4 493 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 SUGT1Q9Y2Z0 365 aa18.97■□□□□ 0.63
MCF2L-208ENST00000397030 MED23Q9ULK4 1368 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 TROVE2P10155 538 aaKnown RBP eCLIP18.96■□□□□ 0.63
MCF2L-208ENST00000397030 ADD1P35611 737 aaKnown RBP18.96■□□□□ 0.63
MCF2L-208ENST00000397030 KRT71Q3SY84 523 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 TMTC1Q8IUR5 882 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 CFAP36Q96G28 342 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 CBX8Q9HC52 389 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 GSTA4O15217 222 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 PAK2Q13177 524 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
MCF2L-208ENST00000397030 GOLGA8IPA6NC78 632 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 GOLGA8JA6NMD2 632 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 RGS16O15492 202 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-208ENST00000397030 ARL4AP40617 200 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 ZNF827Q17R98 1081 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 SMC5Q8IY18 1101 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 POC1B-GALNT4F8VUJ3 575 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 MAP3K7O43318 606 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 BAG2O95816 211 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 ASPRV1Q53RT3 343 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 FAM71BQ8TC56 605 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 INTS4Q96HW7 963 aaKnown RBP18.96■□□□□ 0.63
MCF2L-208ENST00000397030 GDAQ9Y2T3 454 aa18.96■□□□□ 0.63
MCF2L-208ENST00000397030 TUBB4AP04350 444 aa18.96■□□□□ 0.62
MCF2L-208ENST00000397030 COG7P83436 770 aa18.96■□□□□ 0.62
MCF2L-208ENST00000397030 ZBTB41Q5SVQ8 909 aa18.96■□□□□ 0.62
MCF2L-208ENST00000397030 NOSTRINQ8IVI9 506 aa18.96■□□□□ 0.62
MCF2L-208ENST00000397030 LRGUKQ96M69 825 aa18.96■□□□□ 0.62
MCF2L-208ENST00000397030 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.96■□□□□ 0.62
MCF2L-208ENST00000397030 SMIM24O75264 130 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 RPN1P04843 607 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 ATP5JP18859 108 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 HABP4Q5JVS0 413 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 ARHGAP24Q8N264 748 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 MASTLQ96GX5 879 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 BABAM1Q9NWV8 329 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 AFF2P51816 1311 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 ARHGEF37A1IGU5 675 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 NDUFAB1O14561 156 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 BBOX1O75936 387 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 HSPH1Q92598 858 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 SYMPKQ92797 1274 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 RPGRIP1Q96KN7 1286 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 GNAT1P11488 350 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 TUBB4BP68371 445 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 RSRC1Q96IZ7 334 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 GNGT2O14610 69 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 SGSM2O43147 1006 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 PMLP29590 882 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 RNF207Q6ZRF8 634 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 ARHGEF18Q6ZSZ5 1173 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 SLC13A4Q9UKG4 626 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 A0A0D9SFI3 127 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 USP17L8P0C7I0 530 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 ZNF513Q8N8E2 541 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 SDCCAG3Q96C92 435 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 CCDC17Q96LX7 622 aa18.95■□□□□ 0.62
MCF2L-208ENST00000397030 RAVER2Q9HCJ3 691 aaKnown RBP18.95■□□□□ 0.62
MCF2L-208ENST00000397030 FOSP01100 380 aaPredicted RBP18.94■□□□□ 0.62
MCF2L-208ENST00000397030 DARS2Q6PI48 645 aaKnown RBP18.94■□□□□ 0.62
MCF2L-208ENST00000397030 ADCY1Q08828 1119 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 KRT1P04264 644 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 HAUS8Q9BT25 410 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 TSKSQ9UJT2 592 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 DDX41Q9UJV9 622 aaKnown RBP18.94■□□□□ 0.62
MCF2L-208ENST00000397030 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
MCF2L-208ENST00000397030 GPC4O75487 556 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 WDR48Q8TAF3 677 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 TBCCQ15814 346 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 EXOC3L4Q17RC7 722 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 MMP19Q99542 508 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
MCF2L-208ENST00000397030 IGSF3O75054 1194 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CPP00450 1065 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CIITAP33076 1130 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CTNNA1P35221 906 aaKnown RBP18.93■□□□□ 0.62
MCF2L-208ENST00000397030 RUFY4Q6ZNE9 571 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 EFCAB13Q8IY85 973 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CALN1Q9BXU9 219 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 MRPL46Q9H2W6 279 aaKnown RBP18.93■□□□□ 0.62
MCF2L-208ENST00000397030 TTC31Q49AM3 519 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-208ENST00000397030 FAM26FQ5R3K3 315 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms