RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 RBBP6Q7Z6E9 1792 aaKnown RBP16.72■□□□□ 0.27
CBX3-202ENST00000396386 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 OPLAHO14841 1288 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 TBX3O15119 743 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 FCER1AP12319 257 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 TAL1P17542 331 aaPredicted RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 RBL2Q08999 1139 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 STK4Q13043 487 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 NBPF9Q3BBW0 867 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 Q4G0T1 1027 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 KCNK18Q7Z418 384 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 IRF2BP1Q8IU81 584 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 CNGA4Q8IV77 575 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 CHURC1Q8WUH1 139 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 GJA10Q969M2 543 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 P2RX7Q99572 595 aaKnown RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 LGALS16A8MUM7 142 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 MIGA2Q7L4E1 593 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 CSGALNACT2Q8N6G5 542 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 ETNPPLQ8TBG4 499 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 CCDC51Q96ER9 411 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 DUSP9Q99956 384 aaKnown RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 SRRTQ9BXP5 876 aaKnown RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 RANBP17Q9H2T7 1088 aaKnown RBP16.71■□□□□ 0.27
CBX3-202ENST00000396386 PGAP2Q9UHJ9 254 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 UTRNP46939 3433 aa16.71■□□□□ 0.27
CBX3-202ENST00000396386 NFKBIEO00221 500 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 PLA2G6O60733 806 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 ASNSP08243 561 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 ECM1Q16610 540 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 PRR16Q569H4 304 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 HAUS3Q68CZ6 603 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 DYMQ7RTS9 669 aa16.7■□□□□ 0.26
CBX3-202ENST00000396386 GOLGA6L9A6NEM1 432 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 GYPCP04921 128 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 RPS12P25398 132 aaKnown RBP16.69■□□□□ 0.26
CBX3-202ENST00000396386 CIITAP33076 1130 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 ZYXQ15942 572 aaKnown RBP16.69■□□□□ 0.26
CBX3-202ENST00000396386 DDX12PQ92771 950 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 SLC39A2Q9NP94 309 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.69■□□□□ 0.26
CBX3-202ENST00000396386 PPP2R2CQ9Y2T4 447 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 DOCK1Q14185 1865 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 SHTN1A0MZ66 631 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 IDEP14735 1019 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 HOXA13P31271 388 aaPredicted RBP16.69■□□□□ 0.26
CBX3-202ENST00000396386 CASP14P31944 242 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
CBX3-202ENST00000396386 UBXN1Q04323 297 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 PSMD2Q13200 908 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 CCDC174Q6PII3 467 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 ERMNQ8TAM6 284 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 LENG9Q96B70 501 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 FEM1BQ9UK73 627 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 STK24Q9Y6E0 443 aa16.69■□□□□ 0.26
CBX3-202ENST00000396386 SMCHD1A6NHR9 2005 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 A0A1W2PQC6 194 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 POTEB3A0JP26 581 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 POTECB2RU33 542 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 CYP3A4P08684 503 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 POTEBQ6S5H4 581 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 REXO1L1PQ8IX06 675 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
CBX3-202ENST00000396386 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 HPS3Q969F9 1004 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
CBX3-202ENST00000396386 FAM20AQ96MK3 541 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 FEZ1Q99689 392 aa16.68■□□□□ 0.26
CBX3-202ENST00000396386 CTIFO43310 598 aaKnown RBP16.67■□□□□ 0.26
CBX3-202ENST00000396386 FECHP22830 423 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 STAT3P40763 770 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 FXR1P51114 621 aaKnown RBP eCLIP16.67■□□□□ 0.26
CBX3-202ENST00000396386 EHHADHQ08426 723 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 SPIRE1Q08AE8 756 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 RASA3Q14644 834 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 CENPPQ6IPU0 288 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 EHMT1Q9H9B1 1298 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 BMP2KQ9NSY1 1161 aaPredicted RBP16.67■□□□□ 0.26
CBX3-202ENST00000396386 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 MRPL11Q9Y3B7 192 aaKnown RBP16.67■□□□□ 0.26
CBX3-202ENST00000396386 ABCB11O95342 1321 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 PHLPP2Q6ZVD8 1323 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 LTBP3Q9NS15 1303 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 FAM86B1E9PN63 330 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 GCOM1H8Y6P7 765 aaPredicted RBP16.67■□□□□ 0.26
CBX3-202ENST00000396386 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
CBX3-202ENST00000396386 FAM86B2P0C5J1 330 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
CBX3-202ENST00000396386 ZNF76P36508 570 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms