RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 ETNPPLQ8TBG4 499 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
PTPN20-206ENST00000395722 CAPNS2Q96L46 248 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 UBIAD1Q9Y5Z9 338 aa17.13■□□□□ 0.33
PTPN20-206ENST00000395722 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 MEIS1O00470 390 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
PTPN20-206ENST00000395722 MRPS9P82933 396 aaKnown RBP17.12■□□□□ 0.33
PTPN20-206ENST00000395722 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 CYP2W1Q8TAV3 490 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 EFCC1Q9HA90 598 aa17.12■□□□□ 0.33
PTPN20-206ENST00000395722 ASTN1O14525 1302 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 EIF2AK2P19525 551 aaKnown RBP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 FXR2P51116 673 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 PRR16Q569H4 304 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 ARHGEF16Q5VV41 709 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 C17orf99Q6UX52 265 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 VSIG10LQ86VR7 867 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 REM2Q8IYK8 340 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 MXRA8Q9BRK3 442 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 TLR2O60603 784 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 ZNF76P36508 570 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 CNTN2Q02246 1040 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 FAM160A1Q05DH4 1040 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 PAXIP1Q6ZW49 1069 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
PTPN20-206ENST00000395722 ABRAQ8N0Z2 381 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 IWS1Q96ST2 819 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 MMP19Q99542 508 aa17.11■□□□□ 0.33
PTPN20-206ENST00000395722 PLXNB2O15031 1838 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 A0A1B0GVL5 298 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 SOWAHBA6NEL2 793 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 NR3C2P08235 984 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 FCER1AP12319 257 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 PFKFB1P16118 471 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 ITGB5P18084 799 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 NDUFA8P51970 172 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 SETQ01105 290 aaPredicted RBP17.1■□□□□ 0.33
PTPN20-206ENST00000395722 KCTD2Q14681 263 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 TPRNQ4KMQ1 711 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 FGD4Q96M96 766 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 ZFYVE28Q9HCC9 887 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 CPA4Q9UI42 421 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
PTPN20-206ENST00000395722 ZNFX1Q9P2E3 1918 aaKnown RBP17.09■□□□□ 0.33
PTPN20-206ENST00000395722 MSH4O15457 936 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 CA12O43570 354 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 AOC2O75106 756 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 NR1I2O75469 434 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 EDNRBP24530 442 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 CCND2P30279 289 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 USP49Q70CQ1 688 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 PLA2G4DQ86XP0 818 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 SLFN12Q8IYM2 578 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 AK8Q96MA6 479 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 JADE2Q9NQC1 790 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 TMEM63CQ9P1W3 806 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 ADD3Q9UEY8 706 aaKnown RBP17.09■□□□□ 0.33
PTPN20-206ENST00000395722 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 STRNO43815 780 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 ALDH1A1P00352 501 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 MAPK4P31152 587 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 TXKP42681 527 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 ALDH5A1P51649 535 aaPredicted RBP17.09■□□□□ 0.33
PTPN20-206ENST00000395722 CRHR2Q13324 411 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 PDIA5Q14554 519 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 SPECC1Q5M775 1068 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 SYMPKQ92797 1274 aaKnown RBP17.09■□□□□ 0.33
PTPN20-206ENST00000395722 SLC5A5Q92911 643 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 DDX19AQ9NUU7 478 aaKnown RBP17.09■□□□□ 0.33
PTPN20-206ENST00000395722 DACT1Q9NYF0 836 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 THSD7BQ9C0I4 1608 aa17.09■□□□□ 0.33
PTPN20-206ENST00000395722 LOC102724159A0A0B4J2E5 919 aa17.08■□□□□ 0.33
PTPN20-206ENST00000395722 STAM2O75886 525 aa17.08■□□□□ 0.33
PTPN20-206ENST00000395722 GRM1Q13255 1194 aa17.08■□□□□ 0.33
PTPN20-206ENST00000395722 PWP2Q15269 919 aaKnown RBP17.08■□□□□ 0.33
PTPN20-206ENST00000395722 CAVIN1Q6NZI2 390 aaKnown RBP17.08■□□□□ 0.33
PTPN20-206ENST00000395722 EPSTI1Q96J88 318 aa17.08■□□□□ 0.33
PTPN20-206ENST00000395722 INPP4AQ96PE3 977 aaPredicted RBP17.08■□□□□ 0.33
PTPN20-206ENST00000395722 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.33
PTPN20-206ENST00000395722 SPIRE1Q08AE8 756 aa17.08■□□□□ 0.32
PTPN20-206ENST00000395722 TMEM266Q2M3C6 531 aa17.08■□□□□ 0.32
PTPN20-206ENST00000395722 GPR142Q7Z601 462 aa17.08■□□□□ 0.32
PTPN20-206ENST00000395722 MORC4Q8TE76 937 aa17.08■□□□□ 0.32
PTPN20-206ENST00000395722 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
PTPN20-206ENST00000395722 KCNH3Q9ULD8 1083 aa17.08■□□□□ 0.32
PTPN20-206ENST00000395722 PGK2P07205 417 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 ARP10275 920 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 MYCLP12524 364 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-206ENST00000395722 TECP42680 631 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 GRB14Q14449 540 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
PTPN20-206ENST00000395722 ZFP91Q96JP5 570 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms