RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SLITRK6Q9H5Y7 841 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 PASKQ96RG2 1323 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 SUN1O94901 812 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 PMLP29590 882 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 GYS2P54840 703 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 FAM47EQ6ZV65 393 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TESK2Q96S53 571 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 RPN1P04843 607 aaKnown RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TFAMQ00059 246 aaKnown RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 C11orf74Q86VG3 221 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 BTN2A2Q8WVV5 523 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 TRPV6Q9H1D0 765 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 GINM1Q9NU53 330 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 ZSCAN32Q9NX65 697 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 ME3Q16798 604 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 ARMCX3Q9UH62 379 aaPredicted RBP13.28□□□□□ -0.28
SIN3A-202ENST00000394947 LZTS1Q9Y250 596 aa13.28□□□□□ -0.28
SIN3A-202ENST00000394947 SYCE1LA8MT33 242 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 PDE8AO60658 829 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 CSRNP1Q96S65 589 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 MYCBPQ99417 103 aaPredicted RBP13.27□□□□□ -0.28
SIN3A-202ENST00000394947 DCTPP1Q9H773 170 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 KIAA1024Q9UPX6 916 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 MAP3K5Q99683 1374 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 ARAP1Q96P48 1450 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 HECW1Q76N89 1606 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 E2F6O75461 281 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 SLC35F6Q8N357 371 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 CACTINQ8WUQ7 758 aaKnown RBP13.27□□□□□ -0.28
SIN3A-202ENST00000394947 SYMPKQ92797 1274 aaKnown RBP13.27□□□□□ -0.28
SIN3A-202ENST00000394947 CCPG1Q9ULG6 757 aa13.27□□□□□ -0.28
SIN3A-202ENST00000394947 EYA2O00167 538 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 GFPT2O94808 682 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 SLC8A1P32418 973 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.291e-8■■□□□ 11.9
SIN3A-202ENST00000394947 DPP9Q86TI2 863 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 TMCO5AQ8N6Q1 288 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 FBXO41Q8TF61 875 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 TLK1Q9UKI8 766 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 ANP32DO95626 131 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 TRIML2Q8N7C3 387 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 OR8K1Q8NGG5 319 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 AGR3Q8TD06 166 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.29
SIN3A-202ENST00000394947 MLXIPLQ9NP71 852 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 KIF17Q9P2E2 1029 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 USP17L12C9JPN9 530 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 USP17L21D6R901 530 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 LUC7L3O95232 432 aaKnown RBP13.27□□□□□ -0.29
SIN3A-202ENST00000394947 SLC16A2P36021 539 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 GNPTABQ3T906 1256 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 RGS9BPQ6ZS82 235 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.27□□□□□ -0.29
SIN3A-202ENST00000394947 TRAIPQ9BWF2 469 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 TEKT3Q9BXF9 490 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 PALMDQ9NP74 551 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 PNMA2Q9UL42 364 aa13.27□□□□□ -0.29
SIN3A-202ENST00000394947 EFCAB8A8MWE9 144 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 H7C1D1 291 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 NDUFA8P51970 172 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 ARPP21Q9UBL0 812 aaPredicted RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 GOLGA8IPA6NC78 632 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 GOLGA8JA6NMD2 632 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 GNA14O95837 355 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 SRGAP2BP0DMP2 458 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 GRAMD4Q6IC98 578 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 FAM133AQ8N9E0 248 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 ANKRD36BP1Q96IX9 119 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 ZNF215Q9UL58 517 aaPredicted RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 CCDC124Q96CT7 223 aaKnown RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 CNOT6LQ96LI5 555 aaKnown RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 YIPF2Q9BWQ6 316 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 KDM3AQ9Y4C1 1321 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 HNRNPDLO14979 420 aaKnown RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 DDIT3P35638 169 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 MECOMQ03112 1051 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 MFSD14BQ5SR56 506 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 APBA3O96018 575 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 CASP14P31944 242 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 BLIDQ8IZY5 108 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 LZICQ8WZA0 190 aa13.26□□□□□ -0.29
SIN3A-202ENST00000394947 INTS4Q96HW7 963 aaKnown RBP13.26□□□□□ -0.29
SIN3A-202ENST00000394947 SEC24DO94855 1032 aaPredicted RBP13.25□□□□□ -0.29
SIN3A-202ENST00000394947 MYL1P05976 194 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 BCAMP50895 628 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 EXOC3L4Q17RC7 722 aa13.25□□□□□ -0.29
SIN3A-202ENST00000394947 OR6B2Q6IFH4 312 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms