RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 NBPF5PQ86XG9 351 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 NBPF15Q8N660 670 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 ZSCAN9O15535 394 aaPredicted RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 ANGEL1Q9UNK9 670 aaKnown RBP14.47□□□□□ -0.09
USP49-203ENST00000394253 ATP8A1Q9Y2Q0 1164 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
USP49-203ENST00000394253 C16orf96A6NNT2 1141 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 MECOMQ03112 1051 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 C16orf72Q14CZ0 275 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 DNAAF3Q8N9W5 541 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 ARHGEF1Q92888 912 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 C9orf84Q5VXU9 1444 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 GOLGA8IPA6NC78 632 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 SRGAP2CP0DJJ0 459 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 PDE6BP35913 854 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 THOC5Q13769 683 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 CCDC103Q8IW40 242 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 PPHLN1Q8NEY8 458 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 SOS2Q07890 1332 aaPredicted RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 ADKP55263 362 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 PICALMQ13492 652 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 MAGEB6Q8N7X4 407 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 H7C0C1 242 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 ATP5OP48047 213 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 TBC1D10BQ4KMP7 808 aaPredicted RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 SUGT1Q9Y2Z0 365 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 PGRMC1O00264 195 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 ETF1P62495 437 aaKnown RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 TAF1BQ53T94 588 aaPredicted RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 OSBPL1AQ9BXW6 950 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 SMYD3Q9H7B4 428 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 TAB2Q9NYJ8 693 aa14.46□□□□□ -0.09
USP49-203ENST00000394253 ZNF215Q9UL58 517 aaPredicted RBP14.46□□□□□ -0.09
USP49-203ENST00000394253 ZNF233A6NK53 670 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 PJA2O43164 708 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 PAPOLBQ9NRJ5 636 aaKnown RBP14.46□□□□□ -0.1
USP49-203ENST00000394253 MYH3P11055 1940 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 TCP11X2Q5H9J9 407 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 SCYL2Q6P3W7 929 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 ANKLE2Q86XL3 938 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 HESX1Q9UBX0 185 aa14.46□□□□□ -0.1
USP49-203ENST00000394253 SZRD1Q7Z422 152 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 DPH5Q9H2P9 285 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP49-203ENST00000394253 TP53BP2Q13625 1128 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 MORC3Q14149 939 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 NUGGCQ68CJ6 796 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 QKIQ96PU8 341 aaKnown RBP eCLIP14.45□□□□□ -0.15e-8■■■■■ 29.9
USP49-203ENST00000394253 NAIPQ13075 1403 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 SGO2Q562F6 1265 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 TTC38Q5R3I4 469 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 LRRC49Q8IUZ0 686 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 RTL3Q8N8U3 475 aaKnown RBP14.45□□□□□ -0.1
USP49-203ENST00000394253 MAGOHBQ96A72 148 aaKnown RBP14.45□□□□□ -0.1
USP49-203ENST00000394253 PICK1Q9NRD5 415 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 MRGBPQ9NV56 204 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 EHD2Q9NZN4 543 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 BIRC5O15392 142 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 SLC9A5Q14940 896 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 AARS2Q5JTZ9 985 aaKnown RBP14.45□□□□□ -0.1
USP49-203ENST00000394253 C20orf194Q5TEA3 1177 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 GDAP1Q8TB36 358 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 PBKQ96KB5 322 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 GRM8O00222 908 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 IL10P22301 178 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 ATAD3BQ5T9A4 648 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 THEMISQ8N1K5 641 aaPredicted RBP14.45□□□□□ -0.1
USP49-203ENST00000394253 VPS39Q96JC1 886 aa14.45□□□□□ -0.1
USP49-203ENST00000394253 XPO4Q9C0E2 1151 aaKnown RBP14.45□□□□□ -0.1
USP49-203ENST00000394253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.44□□□□□ -0.1
USP49-203ENST00000394253 TBC1D4O60343 1298 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 ECEL1O95672 775 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 KSR1Q8IVT5 923 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 PITPNM3Q9BZ71 974 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 AOC3Q16853 763 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 ARMCX3Q9UH62 379 aaPredicted RBP14.44□□□□□ -0.1
USP49-203ENST00000394253 ZFP69BQ9UJL9 534 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 EIF2S1P05198 315 aaKnown RBP14.44□□□□□ -0.1
USP49-203ENST00000394253 PDCLQ13371 301 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 RGS9BPQ6ZS82 235 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 BTN2A1Q7KYR7 527 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 NYXQ9GZU5 481 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 ZMYND12Q9H0C1 365 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 PLEKHA4Q9H4M7 779 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 MYO1FO00160 1098 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 CDC25BP30305 580 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 AGBL1Q96MI9 1066 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 UBAP1Q9NZ09 502 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 UBXN8O00124 270 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 BTN2A2Q8WVV5 523 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 ABCD1P33897 745 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 KRT25Q7Z3Z0 450 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 CDC23Q9UJX2 597 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 SOX13Q9UN79 622 aa14.44□□□□□ -0.1
USP49-203ENST00000394253 RNF113AO15541 343 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms