RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 PPP1R3GB7ZBB8 358 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 SRGAP2O75044 1071 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 N4BP1O75113 896 aaKnown RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 FAM13AO94988 1023 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ATP2A2P16615 1042 aaKnown RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 TNNI2P48788 182 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 CYP27A1Q02318 531 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PFKFB3Q16875 520 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 HERC4Q5GLZ8 1057 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 TTC19Q6DKK2 380 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 ERGIC2Q96RQ1 377 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 TUBB6Q9BUF5 446 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PHF20Q9BVI0 1012 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 VAT1LQ9HCJ6 419 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 PRDM1O75626 825 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 HLA-DOAP06340 250 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 STX2P32856 288 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 UBE4AQ14139 1066 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 CRYMQ14894 314 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 HIBCHQ6NVY1 386 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 SYN2Q92777 582 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 KAZALD1Q96I82 304 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 SMC6Q96SB8 1091 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.43□□□□□ -0.9
GABRA1-202ENST00000393943 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
GABRA1-202ENST00000393943 EXOC5O00471 708 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 TNFRSF8P28908 595 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 INF2Q27J81 1249 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 GUF1Q8N442 669 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PNMA1Q8ND90 353 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 KIFAP3Q92845 792 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PIH1D3Q9NQM4 214 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 HDAC6Q9UBN7 1215 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 GDAQ9Y2T3 454 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 FAM208AQ9UK61 1670 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 LRRC10BA6NIK2 292 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PODXLO00592 558 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 FSBPO95073 299 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 DHX9Q08211 1270 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 CHRNA2Q15822 529 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 DCAF17Q5H9S7 520 aaPredicted RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PPP1R21Q6ZMI0 780 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 WDR66Q8TBY9 1149 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 FBXO41Q8TF61 875 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 HVCN1Q96D96 273 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 CHMP6Q96FZ7 201 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 LOC102724159A0A0B4J2E5 919 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 SMCO2A6NFE2 343 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 SMIM23A6NLE4 172 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 SLC26A4O43511 780 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 LDHBP07195 334 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 RNASE9P60153 205 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 ZBTB16Q05516 673 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PWP2Q15269 919 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 PTGISQ16647 500 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 ZNF804AQ7Z570 1209 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 DGKHQ86XP1 1220 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 LRRC1Q9BTT6 524 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
GABRA1-202ENST00000393943 ADAMTS13Q76LX8 1427 aa9.42□□□□□ -0.9
GABRA1-202ENST00000393943 FAM187AA6NFU0 413 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SPOPO43791 374 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 MKRN3Q13064 507 aaKnown RBP9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ARHGEF18Q6ZSZ5 1173 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CCDC25Q86WR0 208 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CNPY4Q8N129 248 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 KLHL29Q96CT2 875 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 HOOK2Q96ED9 719 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SGSM3Q96HU1 749 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ANKRD27Q96NW4 1050 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ISCA1Q9BUE6 129 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 VCPKMTQ9H867 229 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SUFUQ9UMX1 484 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 MYO5BQ9ULV0 1848 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ERVV-1B6SEH8 477 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CIB2O75838 187 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ERVK-24P63145 666 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 LMNB2Q03252 620 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SH2D4BQ5SQS7 431 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CCDC174Q6PII3 467 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 PAXIP1Q6ZW49 1069 aaPredicted RBP9.41□□□□□ -0.9
GABRA1-202ENST00000393943 PHLDB2Q86SQ0 1253 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CCDC105Q8IYK2 499 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CEP120Q8N960 986 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SAAL1Q96ER3 474 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 CHP1Q99653 195 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 SLC39A2Q9NP94 309 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 AKAP12Q02952 1782 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ANKRD62A6NC57 917 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 USP17L12C9JPN9 530 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 USP17L21D6R901 530 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 ANKRD65E5RJM6 399 aa9.41□□□□□ -0.9
GABRA1-202ENST00000393943 GFPT2O94808 682 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms