RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FAM114A1Q8IWE2 563 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 LARGE2Q8N3Y3 721 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 CRYGNQ8WXF5 182 aa28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 ZNF277Q9NRM2 450 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 ZNF70Q9UC06 446 aaPredicted RBP28.59■■■□□ 2.17
SMARCD3-203ENST00000392811 COL4A5P29400 1685 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 B4DLN1 442 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 DNM2P50570 870 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 HYIQ5T013 277 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 LRRN4CLQ8ND94 238 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 ARID3AQ99856 593 aa28.58■■■□□ 2.17
SMARCD3-203ENST00000392811 URI1O94763 535 aaPredicted RBP28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 IDEP14735 1019 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 ARHGAP4P98171 946 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 DLGAP5Q15398 846 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 SPICE1Q8N0Z3 855 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 KDM3AQ9Y4C1 1321 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 TTC26A0AVF1 554 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 TAL1P17542 331 aaPredicted RBP28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 CASQ1P31415 396 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 MOXD1Q6UVY6 613 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 FAM151AQ8WW52 585 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 HDAC9Q9UKV0 1011 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 SYNPO2Q9UMS6 1093 aa28.57■■■□□ 2.16
SMARCD3-203ENST00000392811 ECE1P42892 770 aa28.56■■■□□ 2.16
SMARCD3-203ENST00000392811 EHHADHQ08426 723 aa28.56■■■□□ 2.16
SMARCD3-203ENST00000392811 MCTP2Q6DN12 878 aa28.56■■■□□ 2.16
SMARCD3-203ENST00000392811 CYP26C1Q6V0L0 522 aa28.56■■■□□ 2.16
SMARCD3-203ENST00000392811 ZBTB12Q9Y330 459 aaPredicted RBP28.56■■■□□ 2.16
SMARCD3-203ENST00000392811 A0A0U1RQJ8 604 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 MMP14P50281 582 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 ELF2Q15723 593 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 GUF1Q8N442 669 aaKnown RBP28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 ATRIPQ8WXE1 791 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 NT5C3AQ9H0P0 336 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 LZTFL1Q9NQ48 299 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 GOLGB1Q14789 3259 aaKnown RBP28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 CNTNAP1P78357 1384 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 DPEP1P16444 411 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 KCNA3P22001 575 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 MTIF2P46199 727 aaKnown RBP28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 KIFC2Q96AC6 838 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 DNAJC19Q96DA6 116 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 PRR12Q9ULL5 1215 aa28.55■■■□□ 2.16
SMARCD3-203ENST00000392811 OGFOD1Q8N543 542 aa28.54■■■□□ 2.16
SMARCD3-203ENST00000392811 CCDC94Q9BW85 323 aaPredicted RBP28.54■■■□□ 2.16
SMARCD3-203ENST00000392811 ARHGEF10LQ9HCE6 1279 aa28.54■■■□□ 2.16
SMARCD3-203ENST00000392811 CGNQ9P2M7 1197 aaKnown RBP28.54■■■□□ 2.16
SMARCD3-203ENST00000392811 OPLAHO14841 1288 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 PSMD2Q13200 908 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 SPDYE2Q495Y8 402 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 MIIPQ5JXC2 388 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 KIAA1755Q5JYT7 1200 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 SLFN12Q8IYM2 578 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 ACRBPQ8NEB7 543 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 ACER1Q8TDN7 264 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 IRX2Q9BZI1 471 aaPredicted RBP28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 CAPN11Q9UMQ6 739 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 KIAA1024Q9UPX6 916 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 SPDYE3A6NKU9 549 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 FOSP01100 380 aaPredicted RBP28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 STAT3P40763 770 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 PRR16Q569H4 304 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 OR8K1Q8NGG5 319 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 ETNPPLQ8TBG4 499 aa28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 LUC7L2Q9Y383 392 aaKnown RBP28.53■■■□□ 2.16
SMARCD3-203ENST00000392811 E9PMD0 336 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 TBC1D8BQ0IIM8 1120 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 DNAJC7Q99615 494 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 NOC4LQ9BVI4 516 aaKnown RBP28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 POTEB3A0JP26 581 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 POTECB2RU33 542 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 NKRFO15226 690 aaKnown RBP eCLIP28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 SSBP05455 408 aaKnown RBP eCLIP28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 HOXA7P31268 230 aaPredicted RBP28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 SREBF1P36956 1147 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 POTEBQ6S5H4 581 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 GLIS3Q8NEA6 775 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 TMX2Q9Y320 296 aa28.52■■■□□ 2.16
SMARCD3-203ENST00000392811 SLC26A4O43511 780 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 COASYQ13057 564 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 Q4G0T1 1027 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 LENG9Q96B70 501 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 CHP1Q99653 195 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 VEZTQ9HBM0 779 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 ZBTB21Q9ULJ3 1066 aa28.51■■■□□ 2.15
SMARCD3-203ENST00000392811 HOXA13P31271 388 aaPredicted RBP28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 STAT2P52630 851 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 LRRC41Q15345 812 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 ERCC6LQ2NKX8 1250 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 TTYH3Q9C0H2 523 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 RASSF10A6NK89 507 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 MED24O75448 989 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 PLA2G4BP0C869 781 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 KLK7P49862 253 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 LRRC63Q05C16 580 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 SPIRE1Q08AE8 756 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 CDAN1Q8IWY9 1227 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 PANK4Q9NVE7 773 aa28.5■■■□□ 2.15
SMARCD3-203ENST00000392811 FAM86B1E9PN63 330 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms