RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 THOC1Q96FV9 657 aaKnown RBP15.62■□□□□ 0.09
RTF1-201ENST00000389629 VCXQ9H320 206 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 ADAMTS1Q9UHI8 967 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 KNDC1Q76NI1 1749 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 GMNCA6NCL1 334 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 ALX1Q15699 326 aa15.62■□□□□ 0.09
RTF1-201ENST00000389629 NMT2O60551 498 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 PPP1R37O75864 691 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 ELF1P32519 619 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 ARHGAP44Q17R89 818 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 SMC6Q96SB8 1091 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 CCT8L2Q96SF2 557 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 KCND1Q9NSA2 647 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 CCDC87Q9NVE4 849 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 PACSIN2Q9UNF0 486 aaPredicted RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 ADAMTS13Q76LX8 1427 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 CD44P16070 742 aaKnown RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 UAP1Q16222 522 aaPredicted RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 ARL6IP4Q66PJ3 421 aaKnown RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 UBL4BQ8N7F7 174 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 PCDHB13Q9Y5F0 798 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 SALL1Q9NSC2 1324 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 TARSL2A2RTX5 802 aaKnown RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 HLA-DOAP06340 250 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 H2AFZP0C0S5 128 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 H2AFVQ71UI9 128 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 ZNF804AQ7Z570 1209 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 HVCN1Q96D96 273 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 YIPF3Q9GZM5 350 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 FAM133AQ8N9E0 248 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 LZTS2Q9BRK4 669 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 HAUS2Q9NVX0 235 aa15.61■□□□□ 0.09
RTF1-201ENST00000389629 CLTCQ00610 1675 aaKnown RBP15.61■□□□□ 0.09
RTF1-201ENST00000389629 PALMO75781 387 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 MAGOHP61326 146 aaKnown RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 FAM26FQ5R3K3 315 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 MAGOHBQ96A72 148 aaKnown RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 SPDL1Q96EA4 605 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 CUEDC2Q9H467 287 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 ERVK-24P63145 666 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 TAF11Q15544 211 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 ZNF473Q8WTR7 871 aaKnown RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 LARP4BQ92615 738 aaKnown RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 FAM167BQ9BTA0 163 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 LRRD1A4D1F6 860 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 SPDYE3A6NKU9 549 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 KIF1CO43896 1103 aaKnown RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 SUN1O94901 812 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 KRT15P19012 456 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 DDB1Q16531 1140 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 VPS52Q8N1B4 723 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 AGPAT5Q9NUQ2 364 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 PANK4Q9NVE7 773 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 GFPT1Q06210 699 aaPredicted RBP15.6■□□□□ 0.09
RTF1-201ENST00000389629 GPBP1Q86WP2 473 aa15.6■□□□□ 0.09
RTF1-201ENST00000389629 PGRMC1O00264 195 aaKnown RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 TOB1P50616 345 aaPredicted RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 ATP2C1P98194 919 aaPredicted RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 BIRC2Q13490 618 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 CROCCP2Q86T23 111 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 MS4A14Q96JA4 679 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 ATP6V1G3Q96LB4 118 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 MAGEF1Q9HAY2 307 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 CAPN11Q9UMQ6 739 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 ADAM9Q13443 819 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 EYA3Q99504 573 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 TECPR2O15040 1411 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 COL15A1P39059 1388 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 FRMPD2Q68DX3 1309 aaPredicted RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 ITIH6Q6UXX5 1313 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 ATP2A1O14983 1001 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 MYL1P05976 194 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 PCP11498 1178 aaKnown RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 LSP1P33241 339 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 PTPN22Q9Y2R2 807 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 PPP1R3GB7ZBB8 358 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 CACNB1Q02641 598 aaPredicted RBP15.59■□□□□ 0.09
RTF1-201ENST00000389629 ZNF365Q70YC5 407 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 KIFC2Q96AC6 838 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 YY1AP1Q9H869 796 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 RNF14Q9UBS8 474 aa15.59■□□□□ 0.09
RTF1-201ENST00000389629 LRRC53A6NM62 1247 aa15.58■□□□□ 0.09
RTF1-201ENST00000389629 GALNT17Q6IS24 598 aa15.58■□□□□ 0.09
RTF1-201ENST00000389629 EPB41L4AQ9HCS5 686 aaPredicted RBP15.58■□□□□ 0.09
RTF1-201ENST00000389629 ARMCX3Q9UH62 379 aaPredicted RBP15.58■□□□□ 0.09
RTF1-201ENST00000389629 TULP2O00295 520 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 HHATQ5VTY9 493 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 OTUD6AQ7L8S5 288 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 TBCKQ8TEA7 893 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 AK8Q96MA6 479 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 EPN3Q9H201 632 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 SNX12Q9UMY4 172 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 IFT172Q9UG01 1749 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 LAD1O00515 517 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 CALUO43852 315 aaPredicted RBP15.58■□□□□ 0.08
RTF1-201ENST00000389629 GNA14O95837 355 aa15.58■□□□□ 0.08
RTF1-201ENST00000389629 ZNF18P17022 549 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms