RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 NEDD4P46934 1319 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 FAM83BQ5T0W9 1011 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 SYDE2Q5VT97 1194 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 FBF1Q8TES7 1133 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 NSMCE1Q8WV22 266 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 LARP4BQ92615 738 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 SH3GLB2Q9NR46 395 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 TOB2Q14106 344 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 C11orf57Q6ZUT1 292 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 LRRC8AQ8IWT6 810 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 TDRD7Q8NHU6 1098 aaKnown RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 ZNF577Q9BSK1 485 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 INO80BQ9C086 356 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 DCP1AQ9NPI6 582 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 RICTORQ6R327 1708 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 CASP1P29466 404 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 CDC37Q16543 378 aaPredicted RBP14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 ARMCX5Q6P1M9 558 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 TRIM58Q8NG06 486 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 MMS19Q96T76 1030 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 NKIRAS1Q9NYS0 192 aa14.24□□□□□ -0.13
PTPRN2-203ENST00000389418 PALM3A6NDB9 673 aaPredicted RBP14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 CEP104O60308 925 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 VPS72Q15906 364 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 CYB5R4Q7L1T6 521 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 RSPH3Q86UC2 560 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 OTUD5Q96G74 571 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 CEP95Q96GE4 821 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 BZW2Q9Y6E2 419 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 SFI1A8K8P3 1242 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 ADAM9Q13443 819 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 PPP1R2P3Q6NXS1 205 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 EPSTI1Q96J88 318 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 NACA2Q9H009 215 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 ZBTB16Q05516 673 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 ARL6IP4Q66PJ3 421 aaKnown RBP14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 RETREG2Q8NC44 543 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 SMC6Q96SB8 1091 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 FAM184BQ9ULE4 1060 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 SUGT1Q9Y2Z0 365 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 ADGRB1O14514 1584 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 SF3A3Q12874 501 aaKnown RBP eCLIP14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 RASA3Q14644 834 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 PPM1KQ8N3J5 372 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 PNMA3Q9UL41 463 aa14.23□□□□□ -0.13
PTPRN2-203ENST00000389418 TMEM131LA2VDJ0 1609 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 PNMA6FA0A0J9YX94 578 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 CLIC2O15247 247 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 EEF1GP26641 437 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 ETF1P62495 437 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 RC3H1Q5TC82 1133 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 TAB3Q8N5C8 712 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 GDAP1L1Q96MZ0 367 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 SELENOSQ9BQE4 189 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 LSM14BQ9BX40 385 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 PCIF1Q9H4Z3 704 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 CD2APQ9Y5K6 639 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 KDM4FA0A1W2PPD8 638 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 ZNF500O60304 480 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 LGSNQ5TDP6 509 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 DCAF4Q8WV16 495 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 TMEM47Q9BQJ4 181 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 RAVER2Q9HCJ3 691 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 PARP2Q9UGN5 583 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 SLFN14P0C7P3 912 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 ALX1Q15699 326 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 RUFY4Q6ZNE9 571 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 RAB3IL1Q8TBN0 382 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 UBLCP1Q8WVY7 318 aaPredicted RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 RIOK1Q9BRS2 568 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 OGFRQ9NZT2 677 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 HESX1Q9UBX0 185 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 AMFRQ9UKV5 643 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 CPS1P31327 1500 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 HNRNPDLO14979 420 aaKnown RBP14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 TMEM191BP0C7N4 346 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 AP3B2Q13367 1082 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 MIS18BP1Q6P0N0 1132 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 PYCARDQ9ULZ3 195 aa14.22□□□□□ -0.13
PTPRN2-203ENST00000389418 MTERF2Q49AM1 385 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 TAOK1Q7L7X3 1001 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 AP5M1Q9H0R1 490 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 HAUS4Q9H6D7 363 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 CCND2P30279 289 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 PAK2Q13177 524 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 ALCAMQ13740 583 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 TMEM206Q9H813 350 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 KIAA1210Q9ULL0 1709 aa14.21□□□□□ -0.13
PTPRN2-203ENST00000389418 IKBKBO14920 756 aa14.21□□□□□ -0.14
PTPRN2-203ENST00000389418 CAMTA2O94983 1202 aa14.21□□□□□ -0.14
PTPRN2-203ENST00000389418 PSMD2Q13200 908 aa14.21□□□□□ -0.14
PTPRN2-203ENST00000389418 ADAT2Q7Z6V5 191 aaKnown RBP14.21□□□□□ -0.14
PTPRN2-203ENST00000389418 KLHL7Q8IXQ5 586 aa14.21□□□□□ -0.14
PTPRN2-203ENST00000389418 SH2D3AQ9BRG2 576 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms