RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 MORC2Q9Y6X9 1032 aaPredicted RBP14.01□□□□□ -0.17
CIITA-202ENST00000381835 STAT3P40763 770 aa14.01□□□□□ -0.17
CIITA-202ENST00000381835 IL17AQ16552 155 aa14.01□□□□□ -0.17
CIITA-202ENST00000381835 ARL6IP4Q66PJ3 421 aaKnown RBP14.01□□□□□ -0.17
CIITA-202ENST00000381835 POTEEQ6S8J3 1075 aa14.01□□□□□ -0.17
CIITA-202ENST00000381835 NSMFQ6X4W1 530 aa14.01□□□□□ -0.17
CIITA-202ENST00000381835 FMR1NBQ8N0W7 255 aaPredicted RBP14.01□□□□□ -0.17
CIITA-202ENST00000381835 ZNF579Q8NAF0 562 aaKnown RBP14.01□□□□□ -0.17
CIITA-202ENST00000381835 DDX25Q9UHL0 483 aaKnown RBP14.01□□□□□ -0.17
CIITA-202ENST00000381835 KINO60870 393 aaKnown RBP14□□□□□ -0.17
CIITA-202ENST00000381835 OR52Z1P0C646 297 aa14□□□□□ -0.17
CIITA-202ENST00000381835 SREBF1P36956 1147 aa14□□□□□ -0.17
CIITA-202ENST00000381835 HSD17B4P51659 736 aa14□□□□□ -0.17
CIITA-202ENST00000381835 USP11P51784 963 aa14□□□□□ -0.17
CIITA-202ENST00000381835 HERVK_113P62684 666 aa14□□□□□ -0.17
CIITA-202ENST00000381835 UBXN2AP68543 259 aa14□□□□□ -0.17
CIITA-202ENST00000381835 PPP4R3AQ6IN85 833 aa14□□□□□ -0.17
CIITA-202ENST00000381835 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
CIITA-202ENST00000381835 LBX2Q6XYB7 198 aa14□□□□□ -0.17
CIITA-202ENST00000381835 DTHD1Q6ZMT9 781 aa14□□□□□ -0.17
CIITA-202ENST00000381835 USP49Q70CQ1 688 aa14□□□□□ -0.17
CIITA-202ENST00000381835 PAGR1Q9BTK6 254 aa14□□□□□ -0.17
CIITA-202ENST00000381835 BTBD7Q9P203 1132 aa14□□□□□ -0.17
CIITA-202ENST00000381835 CGNQ9P2M7 1197 aaKnown RBP14□□□□□ -0.17
CIITA-202ENST00000381835 RBBP6Q7Z6E9 1792 aaKnown RBP14□□□□□ -0.17
CIITA-202ENST00000381835 LAD1O00515 517 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 ATP2A1O14983 1001 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 SYKP43405 635 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 GTF2A2P52657 109 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 RPS6P62753 249 aaKnown RBP13.99□□□□□ -0.17
CIITA-202ENST00000381835 PABPC4Q13310 644 aaKnown RBP eCLIP13.99□□□□□ -0.17
CIITA-202ENST00000381835 ARID5BQ14865 1188 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 CALCRLQ16602 461 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 EPSTI1Q96J88 318 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 MS4A4AQ96JQ5 239 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 OGFRQ9NZT2 677 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 CCL15-CCL14A0A0B4J2E2 113 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 ZNF202O95125 648 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 CETPP11597 493 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 GCFC2P16383 781 aaKnown RBP13.99□□□□□ -0.17
CIITA-202ENST00000381835 OSBPP22059 807 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 ORC2Q13416 577 aaPredicted RBP13.99□□□□□ -0.17
CIITA-202ENST00000381835 CCL15Q16663 113 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 SPRYD7Q5W111 196 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 RNF207Q6ZRF8 634 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 TEX2Q8IWB9 1127 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 MB21D1Q8N884 522 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 CRYGNQ8WXF5 182 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 ANO10Q9NW15 660 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 KCNH3Q9ULD8 1083 aa13.99□□□□□ -0.17
CIITA-202ENST00000381835 KIF3CO14782 793 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 MARCH6O60337 910 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 SKILP12757 684 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 ZNF76P36508 570 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 TXKP42681 527 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 NAA30Q147X3 362 aaPredicted RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 PTPN14Q15678 1187 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 SLC30A10Q6XR72 485 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 PDILTQ8N807 584 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 NAP1L4Q99733 375 aaKnown RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 EHMT1Q9H9B1 1298 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 HPSEQ9Y251 543 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 CDC25AP30304 524 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 PRPHP41219 470 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 ZNF157P51786 506 aaPredicted RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 PRR16Q569H4 304 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 SYTL5Q8TDW5 730 aaPredicted RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 GJA10Q969M2 543 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 ZFP91Q96JP5 570 aaPredicted RBP13.98□□□□□ -0.17
CIITA-202ENST00000381835 A0A0G2JMZ2 1700 aa13.98□□□□□ -0.17
CIITA-202ENST00000381835 USP27XA6NNY8 438 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 ZBTB48P10074 688 aaPredicted RBP13.97□□□□□ -0.17
CIITA-202ENST00000381835 CYP2C8P10632 490 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 LONP1P36776 959 aaKnown RBP13.97□□□□□ -0.17
CIITA-202ENST00000381835 TECP42680 631 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 BAATQ14032 418 aaPredicted RBP13.97□□□□□ -0.17
CIITA-202ENST00000381835 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 MTMR9Q96QG7 549 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 SDF4Q9BRK5 362 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 ACAD9Q9H845 621 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 PASKQ96RG2 1323 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 CYP3A7-CYP3A51PA0A087WV96 503 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 A0A087WWV3 80 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 FAM237AA0A1B0GTK4 181 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 BTBD19C9JJ37 291 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 FAM86B1E9PN63 330 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 PDHXO00330 501 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 POLR2DO15514 142 aaKnown RBP13.97□□□□□ -0.17
CIITA-202ENST00000381835 KIF20AO95235 890 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 FAM86B2P0C5J1 330 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 CYP3A7P24462 503 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 GHRHRQ02643 423 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 SAPCD2Q86UD0 394 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 DHX40Q8IX18 779 aaKnown RBP13.97□□□□□ -0.17
CIITA-202ENST00000381835 CEP57L1Q8IYX8 460 aa13.97□□□□□ -0.17
CIITA-202ENST00000381835 CYP2W1Q8TAV3 490 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms