RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 BHMTQ93088 406 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 ALKBH8Q96BT7 664 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 DNAJC17Q9NVM6 304 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CNPY2Q9Y2B0 182 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 XRN1Q8IZH2 1706 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 LTN1O94822 1766 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 DEXIO95424 95 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CDR2Q01850 454 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 ITFG2Q969R8 447 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 MGEA5O60502 916 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 ZBED4O75132 1171 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 E2F6O75461 281 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CYP2E1P05181 493 aaPredicted RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 IARSP41252 1262 aaKnown RBP5.31□□□□□ -1.56
PTPRD-203ENST00000381196 PCNX4Q63HM2 1172 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 FOXR2Q6PJQ5 311 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 COPS6Q7L5N1 327 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 SKAP1Q86WV1 359 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 CD209Q9NNX6 404 aa5.31□□□□□ -1.56
PTPRD-203ENST00000381196 RGS16O15492 202 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NR1D1P20393 614 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 U2AF2P26368 475 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SP4Q02446 784 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MINDY2Q8NBR6 621 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 GOPCQ9HD26 462 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 KLC4Q9NSK0 619 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 TBC1D23Q9NUY8 699 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NEDD4P46934 1319 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 WDR91A4D1P6 747 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 GOLGA8JA6NMD2 632 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 FNTAP49354 379 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 YWHAEP62258 255 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SYN2Q92777 582 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 HAUS1Q96CS2 278 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NDEL1Q9GZM8 345 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NT5C3AQ9H0P0 336 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 THAP9Q9H5L6 903 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 DNAJC12Q9UKB3 198 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ADGRA3Q8IWK6 1321 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MAGEB6P1A0A0J9YX57 407 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PI4KAP2A4QPH2 592 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CCDC160A6NGH7 325 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MAN1A2O60476 641 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 KRT13P13646 458 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PSMD2Q13200 908 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 GSTA3Q16772 222 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ARL6IP4Q66PJ3 421 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ANKRD35Q8N283 1001 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PI4KAP1Q8N8J0 262 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RIOK1Q9BRS2 568 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RGL1Q9NZL6 768 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PACSIN2Q9UNF0 486 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ANGPTL3Q9Y5C1 460 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 FAM107AO95990 144 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SERPINB3P29508 390 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MTIF2P46199 727 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 HSP90AA4PQ58FG1 418 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 BCAS4Q8TDM0 211 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CACYBPQ9HB71 228 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 METTL14Q9HCE5 456 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CD2APQ9Y5K6 639 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MYH13Q9UKX3 1938 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SIGLEC1Q9BZZ2 1709 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CBFA2T3O75081 653 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 USP14P54578 494 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PAK1Q13153 545 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SYT10Q6XYQ8 523 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 TNIP2Q8NFZ5 429 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ENOX1Q8TC92 643 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 FGD4Q96M96 766 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 IFIH1Q9BYX4 1025 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NUB1Q9Y5A7 615 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MMEP08473 750 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 METAP2P50579 478 aaKnown RBP eCLIP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 NAPAP54920 295 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CCZ1BP86790 482 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CCZ1P86791 482 aaPredicted RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 CMPK2Q5EBM0 449 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MICAL1Q8TDZ2 1067 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 COG1Q8WTW3 980 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 TRIM47Q96LD4 638 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 AS3MTQ9HBK9 375 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 TEKT2Q9UIF3 430 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RWDD2AQ9UIY3 292 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 URB1O60287 2271 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RANBP1P43487 201 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PPP2R5CQ13362 524 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 WTAPQ15007 396 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 FAM47CQ5HY64 1035 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 FBXO38Q6PIJ6 1188 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 ALDH16A1Q8IZ83 802 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SMG5Q9UPR3 1016 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SLIT3O75094 1523 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 MROH7-TTC4A0A0A0MT08 1334 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 F6X3S4 739 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 PSMA4P25789 261 aaKnown RBP5.3□□□□□ -1.56
PTPRD-203ENST00000381196 RASSF7Q02833 373 aa5.3□□□□□ -1.56
PTPRD-203ENST00000381196 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms