RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 Q4G0T1 1027 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 RRAGBQ5VZM2 374 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 CST9Q5W186 159 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 MOXD1Q6UVY6 613 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 LBX2Q6XYB7 198 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 C11orf57Q6ZUT1 292 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-202ENST00000381118 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
ERCC8-202ENST00000381118 IL31RAQ8NI17 732 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 RAB34Q9BZG1 259 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 BLZF1Q9H2G9 400 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 KCNMB3Q9NPA1 279 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 CCDC39Q9UFE4 941 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
ERCC8-202ENST00000381118 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 DOCK5Q9H7D0 1870 aa9.02□□□□□ -0.97
ERCC8-202ENST00000381118 IGLV3-22A0A075B6J6 115 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ITGBL1O95965 494 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CYP3A4P08684 503 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 SLFN14P0C7P3 912 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CYP2C8P10632 490 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 MYCLP12524 364 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PLCG1P19174 1290 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 DHX8Q14562 1220 aaKnown RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 DPCR1Q3MIW9 517 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CHADLQ6NUI6 762 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PLA2G4DQ86XP0 818 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ETNPPLQ8TBG4 499 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 SNX29Q8TEQ0 813 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PAGE5Q96GU1 130 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 MBOAT7Q96N66 472 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 RMDN3Q96TC7 470 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 MMTAG2Q9BU76 263 aaKnown RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CCSER1Q9C0I3 900 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ACAD9Q9H845 621 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PKD2L1Q9P0L9 805 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PNMA2Q9UL42 364 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ATP2A1O14983 1001 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 OSBPP22059 807 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CIITAP33076 1130 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 HUNKP57058 714 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 FKBP1BP68106 108 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CEP55Q53EZ4 464 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ARHGEF16Q5VV41 709 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 NCAPH2Q6IBW4 605 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 GPAT2Q6NUI2 795 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 KANK3Q6NY19 840 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 LUZP1Q86V48 1076 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 SLFN12Q8IYM2 578 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 LRRC15Q8TF66 581 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CCDC34Q96HJ3 373 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CDK5RAP3Q96JB5 506 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 TXNRD2Q9NNW7 524 aa9.01□□□□□ -0.97
ERCC8-202ENST00000381118 A1CFQ9NQ94 594 aaKnown RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 ZNFX1Q9P2E3 1918 aaKnown RBP9.01□□□□□ -0.97
ERCC8-202ENST00000381118 CCL15-CCL14A0A0B4J2E2 113 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 CHMP2AO43633 222 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 ZNF165P49910 485 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PLCB2Q00722 1185 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PABPC4Q13310 644 aaKnown RBP eCLIP9□□□□□ -0.97
ERCC8-202ENST00000381118 CUL4BQ13620 913 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PDIA5Q14554 519 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PGM5Q15124 567 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 CCL15Q16663 113 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 KRT79Q5XKE5 535 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 ANKRD35Q8N283 1001 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 MB21D1Q8N884 522 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 FAM200AQ8TCP9 573 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 SMARCE1Q969G3 411 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 MTRQ99707 1265 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PYM1Q9BRP8 204 aaKnown RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 WDR11Q9BZH6 1224 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 SPATC1LQ9H0A9 340 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 R3HDMLQ9H3Y0 253 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 PXMP2Q9NR77 195 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 ANO10Q9NW15 660 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 MAP3K20Q9NYL2 800 aaKnown RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 RPTORQ8N122 1335 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 DDX39AO00148 427 aaKnown RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 ARP10275 920 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 ITGB5P18084 799 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 GTF2A2P52657 109 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 MRPS9P82933 396 aaKnown RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 GHRHRQ02643 423 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 Q3C1V9 767 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 WDR78Q5VTH9 848 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 TEX2Q8IWB9 1127 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 MS4A4AQ96JQ5 239 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 MXRA8Q9BRK3 442 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 ZNF577Q9BSK1 485 aa9□□□□□ -0.97
ERCC8-202ENST00000381118 GPBP1L1Q9HC44 474 aaPredicted RBP9□□□□□ -0.97
ERCC8-202ENST00000381118 CBX8Q9HC52 389 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms