RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 MCM3P25205 808 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 CLK2P49760 499 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 UBE2SQ16763 222 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 GPATCH4Q5T3I0 446 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 FOXR2Q6PJQ5 311 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 SP8Q8IXZ3 490 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 DDX12PQ92771 950 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 GJD4Q96KN9 370 aaPredicted RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 DDX4Q9NQI0 724 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 DDX25Q9UHL0 483 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 H3BQF6 201 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 PPP1R11O60927 126 aaPredicted RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 GCFC2P16383 781 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 MRPL12P52815 198 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 USP14P54578 494 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 DDR1Q08345 913 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 EHHADHQ08426 723 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 SEPT2Q15019 361 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 CCDC96Q2M329 555 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 SECISBP2LQ93073 1101 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 NAP1L4Q99733 375 aaKnown RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 PDE11AQ9HCR9 933 aa13.25□□□□□ -0.29
TRIM23-203ENST00000381018 FAM207AQ9NSI2 230 aaPredicted RBP13.25□□□□□ -0.29
TRIM23-203ENST00000381018 SPATA31A6Q5VVP1 1343 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 MACROD2A1Z1Q3 448 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 KLRG2A4D1S0 409 aaPredicted RBP13.24□□□□□ -0.29
TRIM23-203ENST00000381018 UBAP1LF5GYI3 381 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 POLRMTO00411 1230 aaKnown RBP13.24□□□□□ -0.29
TRIM23-203ENST00000381018 MARCH6O60337 910 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 USO1O60763 962 aaKnown RBP13.24□□□□□ -0.29
TRIM23-203ENST00000381018 SHMT1P34896 483 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 CYP27A1Q02318 531 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 KCNK18Q7Z418 384 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 PROM2Q8N271 834 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 TXLNBQ8N3L3 684 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 NUDT12Q9BQG2 462 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 MMRN2Q9H8L6 949 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
TRIM23-203ENST00000381018 ZBTB5O15062 677 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 SRGAP2O75044 1071 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 MAPK8IP2Q13387 824 aaPredicted RBP13.23□□□□□ -0.29
TRIM23-203ENST00000381018 CASP8Q14790 479 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 TTBK2Q6IQ55 1244 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 MYOCDQ8IZQ8 938 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 CERS5Q8N5B7 392 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 TRIM58Q8NG06 486 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 CAPZA3Q96KX2 299 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 IFIH1Q9BYX4 1025 aaKnown RBP13.23□□□□□ -0.29
TRIM23-203ENST00000381018 ACBD3Q9H3P7 528 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 TARSL2A2RTX5 802 aaKnown RBP13.23□□□□□ -0.29
TRIM23-203ENST00000381018 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
TRIM23-203ENST00000381018 ZNF263O14978 683 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 EPHB6O15197 1021 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 LCA5LO95447 670 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 HLA-DOAP06340 250 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 PLEKP08567 350 aaPredicted RBP13.23□□□□□ -0.29
TRIM23-203ENST00000381018 KIF11P52732 1056 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 ATP2B2Q01814 1243 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 COASYQ13057 564 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 MAP9Q49MG5 647 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 SLC27A3Q5K4L6 730 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 IQCEQ6IPM2 695 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 HAS1Q92839 578 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 EXOC4Q96A65 974 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 DNAJC19Q96DA6 116 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 MTMR8Q96EF0 704 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 NT5C3AQ9H0P0 336 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 DEF6Q9H4E7 631 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 PSTPIP2Q9H939 334 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 SUGCTQ9HAC7 445 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 ARHGAP20Q9P2F6 1191 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 PCDHA12Q9UN75 941 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 DUSP10Q9Y6W6 482 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
TRIM23-203ENST00000381018 USP17L10C9JJH3 530 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 TACC1O75410 805 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 SLC16A2P36021 539 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 LRRC41Q15345 812 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 ECM1Q16610 540 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 HYIQ5T013 277 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 NEK11Q8NG66 645 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 ZC3H12CQ9C0D7 883 aaKnown RBP13.22□□□□□ -0.29
TRIM23-203ENST00000381018 GLT8D2Q9H1C3 349 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 SH2D4AQ9H788 454 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 JADE2Q9NQC1 790 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
TRIM23-203ENST00000381018 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
TRIM23-203ENST00000381018 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms