RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ADCY7P51828 1080 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 PDE1BQ01064 536 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 NNTQ13423 1086 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 LLGL1Q15334 1064 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 CALCRLQ16602 461 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 PPP1R13BQ96KQ4 1090 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 PARD6BQ9BYG5 372 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 FMNL1O95466 1100 aaPredicted RBP11.68□□□□□ -0.54
CLCN4-202ENST00000380833 IFNB1P01574 187 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 FAM200BP0CF97 657 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 KCNA2P16389 499 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 IL9RQ01113 521 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 CASP8Q14790 479 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 CC2D2BQ6DHV5 1058 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 ST13P5Q8NFI4 369 aaPredicted RBP11.68□□□□□ -0.54
CLCN4-202ENST00000380833 TRIM55Q9BYV6 548 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 TTC4O95801 387 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 KRT3P12035 628 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 OSTNP61366 133 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 EGFL6Q8IUX8 553 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 UHMK1Q8TAS1 419 aaKnown RBP11.68□□□□□ -0.54
CLCN4-202ENST00000380833 UBN1Q9NPG3 1134 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 FGFR1OP2Q9NVK5 253 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 PPP2R2CQ9Y2T4 447 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 CORO7P57737 925 aa11.68□□□□□ -0.54
CLCN4-202ENST00000380833 BMP15O95972 392 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 GSTA1P08263 222 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 GSTA2P09210 222 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 NR1D1P20393 614 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 PAX7P23759 505 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 RPS6KA2Q15349 733 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 TRIM50Q86XT4 487 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 THAP11Q96EK4 314 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 EFHD1Q9BUP0 239 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 RNMTO43148 476 aaKnown RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 DIAPH2O60879 1101 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 PDE6AP16499 860 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 CDC25BP30305 580 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 GRAMD1BQ3KR37 738 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 HP1BP3Q5SSJ5 553 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 LGSNQ5TDP6 509 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 KIAA1841Q6NSI8 718 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 POLR3CQ9BUI4 534 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 RWDD3Q9Y3V2 267 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 KDRP35968 1356 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 TMEM191CA6NGB0 347 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 NBNO60934 754 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 S100A9P06702 114 aaKnown RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 TMEM191BP0C7N4 346 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 ZNF654Q8IZM8 581 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 PPP4R1Q8TF05 950 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 NLRC4Q9NPP4 1024 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 C6orf203Q9P0P8 240 aaPredicted RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 VPS54Q9P1Q0 977 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 EXOC7Q9UPT5 735 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 KIF14Q15058 1648 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 LRRIQ4A6NIV6 560 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 DDHD2O94830 711 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 MFSD14BQ5SR56 506 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 FAM129AQ9BZQ8 928 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 TAB2Q9NYJ8 693 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 TSR3Q9UJK0 312 aaKnown RBP11.67□□□□□ -0.54
CLCN4-202ENST00000380833 POLA2Q14181 598 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 RPS6KC1Q96S38 1066 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 DNM3Q9UQ16 869 aa11.67□□□□□ -0.54
CLCN4-202ENST00000380833 ATF7P17544 494 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 KCNA3P22001 575 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 RAB14P61106 215 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 FAM81BQ96LP2 452 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 FBXW4P57775 412 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 PUM3Q15397 648 aaKnown RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 TMTC3Q6ZXV5 915 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 CSGALNACT2Q8N6G5 542 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 EEF2KMTQ96G04 330 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 TMEM165Q9HC07 324 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 SEPT3Q9UH03 358 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 CUL7Q14999 1698 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 P4HA2O15460 535 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 CTNND1O60716 968 aaKnown RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 GAS7O60861 476 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 KRT6AP02538 564 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 KRT6BP04259 564 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 KRT6CP48668 564 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 KBTBD12Q3ZCT8 623 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 IQUBQ8NA54 791 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 ATP11CQ8NB49 1132 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 HOOK2Q96ED9 719 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 ASCC2Q9H1I8 757 aaPredicted RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 SPTLC3Q9NUV7 552 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 MARK3P27448 753 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 SERPINB1P30740 379 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 TRMT44Q8IYL2 757 aaKnown RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
CLCN4-202ENST00000380833 GYG1P46976 350 aa11.66□□□□□ -0.54
CLCN4-202ENST00000380833 LIG4P49917 911 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms