RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 USP17L17D6RBQ6 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L19D6RCP7 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L20D6RJB6 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 PSMD14O00487 310 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 SRGAP2O75044 1071 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L24Q0WX57 530 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 BRD3Q15059 726 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 VWA3BQ502W6 1294 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 FKBP15Q5T1M5 1219 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 USP17L6PQ6QN14 398 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 PSTPIP2Q9H939 334 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 SUGCTQ9HAC7 445 aa22.32■■□□□ 1.16
EBF1-202ENST00000380654 FAM207AQ9NSI2 230 aaPredicted RBP22.32■■□□□ 1.16
EBF1-202ENST00000380654 CYLC1P35663 651 aaPredicted RBP22.31■■□□□ 1.16
EBF1-202ENST00000380654 KRT83P78385 493 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 SMC1AQ14683 1233 aaKnown RBP22.31■■□□□ 1.16
EBF1-202ENST00000380654 PPP1R18Q6NYC8 613 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 TRAPPC11Q7Z392 1133 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 KRT26Q7Z3Y9 468 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 GUF1Q8N442 669 aaKnown RBP22.31■■□□□ 1.16
EBF1-202ENST00000380654 TEKT1Q969V4 418 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 NDST4Q9H3R1 872 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 DBNDD1Q9H9R9 158 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 ZNF263O14978 683 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 GPATCH4Q5T3I0 446 aaKnown RBP22.31■■□□□ 1.16
EBF1-202ENST00000380654 RAB21Q9UL25 225 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 SIK3Q9Y2K2 1263 aa22.31■■□□□ 1.16
EBF1-202ENST00000380654 HLA-DOAP06340 250 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 OAS2P29728 719 aaKnown RBP22.3■■□□□ 1.16
EBF1-202ENST00000380654 VSNL1P62760 191 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 EHHADHQ08426 723 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 BEND6Q5SZJ8 279 aaPredicted RBP22.3■■□□□ 1.16
EBF1-202ENST00000380654 EIF3CLB5ME19 914 aaKnown RBP22.3■■□□□ 1.16
EBF1-202ENST00000380654 G3V3G9 751 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 MARCH6O60337 910 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 MRPL12P52815 198 aaKnown RBP22.3■■□□□ 1.16
EBF1-202ENST00000380654 DCAF8Q5TAQ9 597 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 LRRC55Q6ZSA7 311 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 MTMR8Q96EF0 704 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 EIF3CQ99613 913 aaKnown RBP22.3■■□□□ 1.16
EBF1-202ENST00000380654 FGFBP2Q9BYJ0 223 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 PCDHA12Q9UN75 941 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 MYO3BQ8WXR4 1341 aa22.3■■□□□ 1.16
EBF1-202ENST00000380654 A0A1W2PQJ5 194 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 SSBP05455 408 aaKnown RBP eCLIP22.29■■□□□ 1.16
EBF1-202ENST00000380654 CRKP46108 304 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 FIGNQ5HY92 759 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 HHIPL2Q6UWX4 724 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 KIAA0825Q8IV33 1275 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 CCDC155Q8N6L0 562 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 DNAJC19Q96DA6 116 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 ABCB6Q9NP58 842 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 NRXN2Q9P2S2 1712 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 MACROD2A1Z1Q3 448 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 KRT86O43790 486 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 CCDC170Q8IYT3 715 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 MMRN2Q9H8L6 949 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 RNF216Q9NWF9 866 aaPredicted RBP22.29■■□□□ 1.16
EBF1-202ENST00000380654 TBC1D7Q9P0N9 293 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 SIPA1L1O43166 1804 aa22.29■■□□□ 1.16
EBF1-202ENST00000380654 NPR1P16066 1061 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 COASYQ13057 564 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 MAN2A1Q16706 1144 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 QRICH1Q2TAL8 776 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 C2CD5Q86YS7 1000 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 CAPZA3Q96KX2 299 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 MMS19Q96T76 1030 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 ARHGAP20Q9P2F6 1191 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 ATF5Q9Y2D1 282 aaPredicted RBP22.28■■□□□ 1.16
EBF1-202ENST00000380654 DDTLA6NHG4 134 aaPredicted RBP22.28■■□□□ 1.16
EBF1-202ENST00000380654 E9PMD0 336 aa22.28■■□□□ 1.16
EBF1-202ENST00000380654 EEF2P13639 858 aaKnown RBP22.28■■□□□ 1.16
EBF1-202ENST00000380654 CACNB1Q02641 598 aaPredicted RBP22.28■■□□□ 1.16
EBF1-202ENST00000380654 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
EBF1-202ENST00000380654 COL11A2P13942 1736 aaPredicted RBP22.27■■□□□ 1.16
EBF1-202ENST00000380654 BRWD3Q6RI45 1802 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 MAP2K7O14733 419 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 IPO7O95373 1038 aaKnown RBP22.27■■□□□ 1.16
EBF1-202ENST00000380654 SNAP25P60880 206 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 LRRC63Q05C16 580 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 ZNF662Q6ZS27 426 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 SMCR8Q8TEV9 937 aaPredicted RBP22.27■■□□□ 1.16
EBF1-202ENST00000380654 HNRNPLLQ8WVV9 542 aaKnown RBP22.27■■□□□ 1.16
EBF1-202ENST00000380654 CCDC42Q96M95 316 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 PLAGL2Q9UPG8 496 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 SAR1BQ9Y6B6 198 aa22.27■■□□□ 1.16
EBF1-202ENST00000380654 NPHP3-ACAD11A0A0J9YXS1 232 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 ERICH4A6NGS2 130 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 POTEB2H3BUK9 544 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 RAD51AP2Q09MP3 1159 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 COL23A1Q86Y22 540 aaPredicted RBP22.26■■□□□ 1.15
EBF1-202ENST00000380654 KIAA1024Q9UPX6 916 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 PCDHA1Q9Y5I3 950 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 C10orf71Q711Q0 1435 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 H3BQF6 201 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 STAT3P40763 770 aa22.26■■□□□ 1.15
EBF1-202ENST00000380654 PAPD7Q5XG87 772 aaKnown RBP22.26■■□□□ 1.15
EBF1-202ENST00000380654 POTEB3A0JP26 581 aa22.25■■□□□ 1.15
EBF1-202ENST00000380654 POTECB2RU33 542 aa22.25■■□□□ 1.15
EBF1-202ENST00000380654 ZNF185O15231 689 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms