RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 LIMA1Q9UHB6 759 aaKnown RBP13.43□□□□□ -0.26
USP3-202ENST00000380324 PGAP2Q9UHJ9 254 aa13.43□□□□□ -0.26
USP3-202ENST00000380324 H7C1D1 291 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 PBX1P40424 430 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 GMPSP49915 693 aaPredicted RBP13.42□□□□□ -0.26
USP3-202ENST00000380324 TTI2Q6NXR4 508 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 PPFIBP1Q86W92 1011 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 IRF2BP1Q8IU81 584 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 CSGALNACT2Q8N6G5 542 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 DDX12PQ92771 950 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 SRRTQ9BXP5 876 aaKnown RBP13.42□□□□□ -0.26
USP3-202ENST00000380324 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 CYP3A7-CYP3A51PA0A087WV96 503 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 CYP3A7P24462 503 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 KCNJ6P48051 423 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 RBL2Q08999 1139 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 DGKZQ13574 1117 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 CYP2W1Q8TAV3 490 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 ETNPPLQ8TBG4 499 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 TBC1D5Q92609 795 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 P2RX5Q93086 422 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 LENG9Q96B70 501 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 KIAA1024Q9UPX6 916 aa13.42□□□□□ -0.26
USP3-202ENST00000380324 POTEFA5A3E0 1075 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 AKR1B15C9JRZ8 316 aaPredicted RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 E9PMD0 336 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 ARHGAP6O43182 974 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 FOSP01100 380 aaPredicted RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 ZNF76P36508 570 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 UBXN2AP68543 259 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 NCAPH2Q6IBW4 605 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 POTEGQ6S5H5 508 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 POTEEQ6S8J3 1075 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 MOXD1Q6UVY6 613 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 UNC13DQ70J99 1090 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 CHURC1Q8WUH1 139 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 DHTKD1Q96HY7 919 aaPredicted RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 KCND1Q9NSA2 647 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 GYPCP04921 128 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 CASP14P31944 242 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 MMP14P50281 582 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 PRELPP51888 382 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 UBXN1Q04323 297 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 RAD51AP2Q09MP3 1159 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 SEMA3FQ13275 785 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 ANKRD40Q6AI12 368 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 TEPSINQ96N21 525 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 DUSP9Q99956 384 aaKnown RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 NT5C3AQ9H0P0 336 aa13.41□□□□□ -0.26
USP3-202ENST00000380324 RANBP17Q9H2T7 1088 aaKnown RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
USP3-202ENST00000380324 BICDL2A1A5D9 508 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 MFAP3LO75121 409 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 MED24O75448 989 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 CCNE1P24864 410 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 ZNF280AP59817 542 aaPredicted RBP13.4□□□□□ -0.26
USP3-202ENST00000380324 CACNB1Q02641 598 aaPredicted RBP13.4□□□□□ -0.26
USP3-202ENST00000380324 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 GLIS3Q8NEA6 775 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 SOWAHDA6NJG2 315 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 PHF20L1A8MW92 1017 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 PIK3CDO00329 1044 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
USP3-202ENST00000380324 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
USP3-202ENST00000380324 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 Q4G0T1 1027 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 HAUS3Q68CZ6 603 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 TOGARAM2Q6ZUX3 1019 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 ZFP91Q96JP5 570 aaPredicted RBP13.4□□□□□ -0.26
USP3-202ENST00000380324 CNOT6LQ96LI5 555 aaKnown RBP13.4□□□□□ -0.26
USP3-202ENST00000380324 DESI2Q9BSY9 194 aa13.4□□□□□ -0.26
USP3-202ENST00000380324 ITIH6Q6UXX5 1313 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 LRRC10BA6NIK2 292 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 GCOM1H8Y6P7 765 aaPredicted RBP13.39□□□□□ -0.27
USP3-202ENST00000380324 MEIS1O00470 390 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 DYNC1I1O14576 645 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 MSH4O15457 936 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 STX10O60499 249 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 POLR2MP0CAP2 368 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 EEF1GP26641 437 aaKnown RBP13.39□□□□□ -0.27
USP3-202ENST00000380324 CYP4A11Q02928 519 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 MTF1Q14872 753 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 LRRC41Q15345 812 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 FAM160B2Q86V87 743 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 NLGN2Q8NFZ4 835 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 CNOT7Q9UIV1 285 aaKnown RBP13.39□□□□□ -0.27
USP3-202ENST00000380324 NPHP3-ACAD11A0A0J9YXS1 232 aa13.39□□□□□ -0.27
USP3-202ENST00000380324 PVALEFA0A1B0GWK0 134 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms