RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 KRT32Q14532 448 aa28.49■■■□□ 2.15
TNFRSF4-201ENST00000379236 PGM5Q15124 567 aa28.49■■■□□ 2.15
TNFRSF4-201ENST00000379236 ZNF697Q5TEC3 545 aa28.49■■■□□ 2.15
TNFRSF4-201ENST00000379236 ALDH8A1Q9H2A2 487 aaPredicted RBP28.49■■■□□ 2.15
TNFRSF4-201ENST00000379236 PLEKHA8P1O95397 391 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 CSF2RAP15509 400 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 CYP2C18P33260 490 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 KCNV1Q6PIU1 500 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 RAB11FIP4Q86YS3 637 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 AFG1LQ8WV93 481 aa28.48■■■□□ 2.15
TNFRSF4-201ENST00000379236 MMP3P08254 477 aa28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 ARHGAP1Q07960 439 aa28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 NBPF20Q3BBV1 942 aa28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 PSRC1Q6PGN9 363 aaPredicted RBP28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 MICU3Q86XE3 530 aa28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 DHX37Q8IY37 1157 aaKnown RBP28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 SMARCC2Q8TAQ2 1214 aa28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 DDX41Q9UJV9 622 aaKnown RBP28.47■■■□□ 2.15
TNFRSF4-201ENST00000379236 CASTP20810 708 aaKnown RBP28.46■■■□□ 2.15
TNFRSF4-201ENST00000379236 SMAD3P84022 425 aaKnown RBP28.46■■■□□ 2.15
TNFRSF4-201ENST00000379236 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.46■■■□□ 2.15
TNFRSF4-201ENST00000379236 TRMT13Q9NUP7 481 aaKnown RBP28.46■■■□□ 2.15
TNFRSF4-201ENST00000379236 NOD1Q9Y239 953 aa28.46■■■□□ 2.15
TNFRSF4-201ENST00000379236 LAMC2Q13753 1193 aa28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 DGKDQ16760 1214 aa28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 FAM109BQ6ICB4 259 aaPredicted RBP28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 NFRKBQ6P4R8 1299 aa28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 VSIG10LQ86VR7 867 aa28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 SGMS1Q86VZ5 419 aa28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 CMTR1Q8N1G2 835 aaKnown RBP28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 SRBD1Q8N5C6 995 aaKnown RBP28.45■■■□□ 2.14
TNFRSF4-201ENST00000379236 CCL23P55773 120 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 FGD1P98174 961 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 PTPN11Q06124 597 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 COL9A3Q14050 684 aaPredicted RBP28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 GNPTABQ3T906 1256 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 DHX32Q7L7V1 743 aaKnown RBP28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 CCDC82Q8N4S0 544 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 FANCBQ8NB91 859 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 NOC4LQ9BVI4 516 aaKnown RBP28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 IL23AQ9NPF7 189 aa28.44■■■□□ 2.14
TNFRSF4-201ENST00000379236 DOCK5Q9H7D0 1870 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 HMGB1P09429 215 aaKnown RBP28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 ACRP10323 421 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 IL31RAQ8NI17 732 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 EMID1Q96A84 441 aaPredicted RBP28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 FAM161BQ96MY7 647 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 MTIF3Q9H2K0 278 aaKnown RBP28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 RBM28Q9NW13 759 aaKnown RBP28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 MTMR10Q9NXD2 777 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 UMODL1Q5DID0 1318 aa28.43■■■□□ 2.14
TNFRSF4-201ENST00000379236 TANC1Q9C0D5 1861 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 CYP2C9P11712 490 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 TSGA10IPQ3SY00 556 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 TMTC3Q6ZXV5 915 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 TCEANC2Q96MN5 208 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 KATNAL1Q9BW62 490 aa28.42■■■□□ 2.14
TNFRSF4-201ENST00000379236 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 STAM2O75886 525 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 TMEM240Q5SV17 173 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 ZNF365Q70YC5 407 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 RASEFQ8IZ41 740 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 RPUSD2Q8IZ73 545 aaKnown RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 PPTC7Q8NI37 304 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 PPP1R13LQ8WUF5 828 aa28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 ZFP91Q96JP5 570 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 NAP1L2Q9ULW6 460 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 TRIP12Q14669 1992 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF4-201ENST00000379236 SCN5AQ14524 2016 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 ZBTB43O43298 467 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 SORBS3O60504 671 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 GGPS1O95749 300 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 TGFB3P10600 412 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 ADCK5Q3MIX3 580 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 APOA5Q6Q788 366 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 USP17L6PQ6QN14 398 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 SPATA33Q96N06 139 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 MLXIPQ9HAP2 919 aa28.4■■■□□ 2.14
TNFRSF4-201ENST00000379236 RGS20O76081 388 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 REC8O95072 547 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 FGBP02675 491 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 EXOSC10Q01780 885 aaKnown RBP28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 RTN1Q16799 776 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 RETREG2Q8NC44 543 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 WNT8AQ9H1J5 351 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 PSTPIP2Q9H939 334 aa28.39■■■□□ 2.14
TNFRSF4-201ENST00000379236 FRMPD4Q14CM0 1322 aa28.39■■■□□ 2.13
TNFRSF4-201ENST00000379236 hCG_1642624A0A1W2PR95 340 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 PIK3CDO00329 1044 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 UBA1P22314 1058 aaKnown RBP28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 CELF3Q5SZQ8 465 aaKnown RBP28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 C16orf59Q7L2K0 433 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 HEATR3Q7Z4Q2 680 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 CCDC155Q8N6L0 562 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 C7orf31Q8N865 590 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 SCLYQ96I15 445 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 ALG1Q9BT22 464 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 STXBP5LQ9Y2K9 1186 aa28.38■■■□□ 2.13
TNFRSF4-201ENST00000379236 GBF1Q92538 1859 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms