RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TCTN1Q2MV58 587 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 TMEM31Q5JXX7 168 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 CCDC62Q6P9F0 684 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 CNKSR3Q6P9H4 555 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 C7orf31Q8N865 590 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 KAT2BQ92831 832 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 CTAGE1Q96RT6 745 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 COL20A1Q9P218 1284 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 HDAC6Q9UBN7 1215 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 KIAA1217Q5T5P2 1943 aa20.82■□□□□ 0.92
PDLIM4-202ENST00000379018 TRIM6-TRIM34B2RNG4 842 aa20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 NBNO60934 754 aa20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 SNHG28P0DPA3 235 aa20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 EIF2AK2P19525 551 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 CASTP20810 708 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 GPNMBQ14956 572 aa20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 GPATCH4Q5T3I0 446 aaKnown RBP20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 SYTL5Q8TDW5 730 aaPredicted RBP20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 KHSRPQ92945 711 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 TTC14Q96N46 770 aa20.81■□□□□ 0.92
PDLIM4-202ENST00000379018 CCDC171Q6TFL3 1326 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 MYH7BA7E2Y1 1941 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 CKBP12277 381 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 PSEN2P49810 448 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 PDE1AP54750 535 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 STXBP2Q15833 593 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 DGKDQ16760 1214 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 ARHGEF16Q5VV41 709 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 NSUN6Q8TEA1 469 aaKnown RBP20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 RILPL2Q969X0 211 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 RMDN3Q96TC7 470 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 VAT1LQ9HCJ6 419 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 GTF2IRD1Q9UHL9 959 aa20.8■□□□□ 0.92
PDLIM4-202ENST00000379018 ABCB11O95342 1321 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 ZNF200P98182 395 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 MFSD10Q14728 455 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 SESTD1Q86VW0 696 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 ADGRF4Q8IZF3 695 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 PNMA1Q8ND90 353 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 ESR2Q92731 530 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 TGS1Q96RS0 853 aaKnown RBP20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 RNF41Q9H4P4 317 aaPredicted RBP20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 MRVI1Q9Y6F6 885 aa20.79■□□□□ 0.92
PDLIM4-202ENST00000379018 GJB5O95377 273 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 KIAA0753Q2KHM9 967 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 DHX37Q8IY37 1157 aaKnown RBP20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 RGS22Q8NE09 1264 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 RAD9AQ99638 391 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 KAT14Q9H8E8 782 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 SUGCTQ9HAC7 445 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 SIP14410 1827 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 ZMYM6O95789 1325 aa20.78■□□□□ 0.92
PDLIM4-202ENST00000379018 ABHD14A-ACY1A0A1B0GW23 586 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 LINC01553A4QN01 128 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 KDM4AO75164 1064 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 CFBP00751 764 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 IKBKEQ14164 716 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 QRICH1Q2TAL8 776 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 ZNF618Q5T7W0 954 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 MCF2L2Q86YR7 1114 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 WNT8BQ93098 351 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 KATNAL1Q9BW62 490 aa20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 UBE2ZQ9H832 354 aaPredicted RBP20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 DDX41Q9UJV9 622 aaKnown RBP20.77■□□□□ 0.92
PDLIM4-202ENST00000379018 CXCL10P02778 98 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 MYCLP12524 364 aaPredicted RBP20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 KCNA5P22460 613 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 FBXO11Q86XK2 927 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 MYOCDQ8IZQ8 938 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 IWS1Q96ST2 819 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 CD320Q9NPF0 282 aa20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 MRPL11Q9Y3B7 192 aaKnown RBP20.76■□□□□ 0.91
PDLIM4-202ENST00000379018 B4E1Z4 1266 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 ZNF213O14771 459 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 PARNO95453 639 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 PCP11498 1178 aaKnown RBP20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 SSTR3P32745 418 aaPredicted RBP20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 ERVK-21P61565 698 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 PTK7Q13308 1070 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 IQCA1Q86XH1 822 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 C17orf80Q9BSJ5 609 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 C11orf16Q9NQ32 467 aa20.75■□□□□ 0.91
PDLIM4-202ENST00000379018 NR3C2P08235 984 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 RBL2Q08999 1139 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 MBTPS1Q14703 1052 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 ASPRV1Q53RT3 343 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 DGKHQ86XP1 1220 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 FBXO22Q8NEZ5 403 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 PPTC7Q8NI37 304 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 ZFP91Q96JP5 570 aaPredicted RBP20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 LNPKQ9C0E8 428 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 PXMP2Q9NR77 195 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 LMCD1Q9NZU5 365 aa20.74■□□□□ 0.91
PDLIM4-202ENST00000379018 EFCAB14O75071 495 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 LGR5O75473 907 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 F2P00734 622 aa20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 PARP1P09874 1014 aaKnown RBP20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 HOXD11P31277 338 aaPredicted RBP20.73■□□□□ 0.91
PDLIM4-202ENST00000379018 THPOP40225 353 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 837.8 ms