RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 TNNI2P48788 182 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 METP08581 1390 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
NPHS1-202ENST00000378910 TUFMP49411 452 aaKnown RBP12.88□□□□□ -0.35
NPHS1-202ENST00000378910 PUM3Q15397 648 aaKnown RBP12.88□□□□□ -0.35
NPHS1-202ENST00000378910 INTS8Q75QN2 995 aaKnown RBP12.88□□□□□ -0.35
NPHS1-202ENST00000378910 TUBGCP2Q9BSJ2 902 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
NPHS1-202ENST00000378910 GPR108Q9NPR9 543 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 SEL1LQ9UBV2 794 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 PCDHGA4Q9Y5G9 962 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 IQCA1LA6NCM1 817 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 ADORA1P30542 326 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 NNTQ13423 1086 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 SFMBT2Q5VUG0 894 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 DYMQ7RTS9 669 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 PCDHB6Q9Y5E3 794 aa12.88□□□□□ -0.35
NPHS1-202ENST00000378910 B4DLN1 442 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 TEX33O43247 280 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 LDHCP07864 332 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 GGCXP38435 758 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 CYP27A1Q02318 531 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 C6orf163Q5TEZ5 329 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 RBM43Q6ZSC3 357 aaKnown RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 ZSCAN29Q8IWY8 852 aaPredicted RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 TAF6LQ9Y6J9 622 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 ABCC3O15438 1527 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 KCNK3O14649 394 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 HEXIM1O94992 359 aaKnown RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 ANP32DO95626 131 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 CXCR5P32302 372 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 KRT31Q15323 416 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 DCAF17Q5H9S7 520 aaPredicted RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 THOC7Q6I9Y2 204 aaKnown RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 CABP7Q86V35 215 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 MIS12Q9H081 205 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 EPB41L5Q9HCM4 733 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 SPHKAPQ2M3C7 1700 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 KRT14P02533 472 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 MMP1P03956 469 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 S100BP04271 92 aaPredicted RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 NKIRAS1Q9NYS0 192 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 SUCLA2Q9P2R7 463 aaPredicted RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 SRPRBQ9Y5M8 271 aaKnown RBP12.87□□□□□ -0.35
NPHS1-202ENST00000378910 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
NPHS1-202ENST00000378910 EFCAB6Q5THR3 1501 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SRGAP2O75044 1071 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 FESP07332 822 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 IFNAR1P17181 557 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 TXKP42681 527 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 IGBP1P78318 339 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 ZBTB16Q05516 673 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 PLCB4Q15147 1175 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 CENPKQ9BS16 269 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 CORO1CQ9ULV4 474 aaPredicted RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 ZFYVE16Q7Z3T8 1539 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 OPHN1O60890 802 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SKIP12755 728 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 PTPREP23469 700 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 MRPS25P82663 173 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SLC7A5Q01650 507 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SEPT2Q15019 361 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 STXBP4Q6ZWJ1 553 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SMC1BQ8NDV3 1235 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 ERMNQ8TAM6 284 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 USP42Q9H9J4 1324 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 EIF3HO15372 352 aaKnown RBP eCLIP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SLC26A4O43511 780 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 ZNF131P52739 623 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 EPHA10Q5JZY3 1008 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 STOX1Q6ZVD7 989 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 LONP2Q86WA8 852 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 GSPT2Q8IYD1 628 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 MYOCDQ8IZQ8 938 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 LPIN2Q92539 896 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 RRP36Q96EU6 259 aaKnown RBP12.86□□□□□ -0.35
NPHS1-202ENST00000378910 KRT12Q99456 494 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 TNKSO95271 1327 aa12.86□□□□□ -0.35
NPHS1-202ENST00000378910 SH2B2O14492 632 aaPredicted RBP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 SASH3O75995 380 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 MSL3P1P0C860 447 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 CDC25CP30307 473 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 RHBDL3P58872 404 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 PUS10Q3MIT2 529 aaKnown RBP12.85□□□□□ -0.35
NPHS1-202ENST00000378910 ALS2CLQ60I27 953 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 TMEM154Q6P9G4 183 aa12.85□□□□□ -0.35
NPHS1-202ENST00000378910 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms