RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 TRERF1Q96PN7 1200 aa23.33■■□□□ 1.32
SKI-201ENST00000378536 ACCSQ96QU6 501 aa23.33■■□□□ 1.32
SKI-201ENST00000378536 COPB1P53618 953 aaKnown RBP23.32■■□□□ 1.32
SKI-201ENST00000378536 DCUN1D2Q6PH85 259 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 SMYD4Q8IYR2 804 aaPredicted RBP23.32■■□□□ 1.32
SKI-201ENST00000378536 PRPF38AQ8NAV1 312 aaKnown RBP23.32■■□□□ 1.32
SKI-201ENST00000378536 IFIH1Q9BYX4 1025 aaKnown RBP23.32■■□□□ 1.32
SKI-201ENST00000378536 DISC1Q9NRI5 854 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 MYOM1P52179 1685 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 NR2F2P24468 414 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 RESP18Q5W5W9 173 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 RMDN3Q96TC7 470 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 ZNF70Q9UC06 446 aaPredicted RBP23.32■■□□□ 1.32
SKI-201ENST00000378536 IKBKBO14920 756 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 RHOXF2BP0C7M4 288 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 RASA3Q14644 834 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 LRRC41Q15345 812 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 RHOXF2Q9BQY4 288 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 AKT3Q9Y243 479 aa23.32■■□□□ 1.32
SKI-201ENST00000378536 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 PALM3A6NDB9 673 aaPredicted RBP23.31■■□□□ 1.32
SKI-201ENST00000378536 MTMR4Q9NYA4 1195 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 RRP9O43818 475 aaKnown RBP23.31■■□□□ 1.32
SKI-201ENST00000378536 TMEM191BP0C7N4 346 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 PTPREP23469 700 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 SYCE1Q8N0S2 351 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 RNF169Q8NCN4 708 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 CCDC26Q8TAB7 109 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 TUBGCP2Q9BSJ2 902 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 SERPINA10Q9UK55 444 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 KLRK1P26718 216 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 PPP2R3AQ06190 1150 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 PSMD2Q13200 908 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 RNF34Q969K3 372 aa23.31■■□□□ 1.32
SKI-201ENST00000378536 EPB41L4AQ9HCS5 686 aaPredicted RBP23.31■■□□□ 1.32
SKI-201ENST00000378536 COBLO75128 1261 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 EEF1GP26641 437 aaKnown RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 CBX1P83916 185 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 TSNARE1Q96NA8 513 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 HOXA7P31268 230 aaPredicted RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 ABCD1P33897 745 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 VAV2P52735 878 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 CTTNQ14247 550 aaKnown RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 STAG2Q8N3U4 1231 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 TMEM206Q9H813 350 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 MTMR1Q13613 665 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 RNF146Q9NTX7 359 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 TUBBP07437 444 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 POLR2FP61218 127 aaKnown RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 C11orf57Q6ZUT1 292 aaPredicted RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 IFT81Q8WYA0 676 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 OTUD5Q96G74 571 aa23.3■■□□□ 1.32
SKI-201ENST00000378536 ZNF215Q9UL58 517 aaPredicted RBP23.3■■□□□ 1.32
SKI-201ENST00000378536 FDX1P10109 184 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 ATF7P17544 494 aaPredicted RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 C16orf86Q6ZW13 317 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 PARVGQ9HBI0 331 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 PSMC2P35998 433 aaKnown RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 CALCOCO2Q13137 446 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 ORC2Q13416 577 aaPredicted RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 MTERF2Q49AM1 385 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 ZNF579Q8NAF0 562 aaKnown RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 EEF2KMTQ96G04 330 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 MTRF1LQ9UGC7 380 aaKnown RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 COMMD10Q9Y6G5 202 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 JAK3P52333 1124 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 STXBP2Q15833 593 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 PDXDC2PQ6P474 469 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 U2AF1L4Q8WU68 220 aaKnown RBP23.29■■□□□ 1.32
SKI-201ENST00000378536 TMEM260Q9NX78 707 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 GPR75-ASB3A0A0A6YYF3 556 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 ZEB2O60315 1214 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 RSPH3Q86UC2 560 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 IGDCC4Q8TDY8 1250 aa23.29■■□□□ 1.32
SKI-201ENST00000378536 TERF1P54274 439 aa23.28■■□□□ 1.32
SKI-201ENST00000378536 EXOC3L4Q17RC7 722 aa23.28■■□□□ 1.32
SKI-201ENST00000378536 MYO1AQ9UBC5 1043 aa23.28■■□□□ 1.32
SKI-201ENST00000378536 RWDD2AQ9UIY3 292 aa23.28■■□□□ 1.32
SKI-201ENST00000378536 ARHGAP4P98171 946 aa23.28■■□□□ 1.32
SKI-201ENST00000378536 NSUN6Q8TEA1 469 aaKnown RBP23.28■■□□□ 1.32
SKI-201ENST00000378536 INO80B-WBP1J3KQ70 363 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 RGL2O15211 777 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 FKBP3Q00688 224 aaKnown RBP23.27■■□□□ 1.32
SKI-201ENST00000378536 SRBD1Q8N5C6 995 aaKnown RBP23.27■■□□□ 1.32
SKI-201ENST00000378536 INO80BQ9C086 356 aaPredicted RBP23.27■■□□□ 1.32
SKI-201ENST00000378536 FAM151AQ8WW52 585 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 KIF2CQ99661 725 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 SPZ1Q9BXG8 430 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 EMILIN3Q9NT22 766 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 MYL7Q01449 175 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 CCDC117Q8IWD4 279 aaPredicted RBP23.27■■□□□ 1.32
SKI-201ENST00000378536 PPM1KQ8N3J5 372 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 POLLQ9UGP5 575 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 TSKSQ9UJT2 592 aa23.27■■□□□ 1.32
SKI-201ENST00000378536 RPS12P25398 132 aaKnown RBP23.27■■□□□ 1.31
SKI-201ENST00000378536 KMT5BQ4FZB7 885 aa23.27■■□□□ 1.31
SKI-201ENST00000378536 C17orf53Q8N3J3 647 aaPredicted RBP23.27■■□□□ 1.31
SKI-201ENST00000378536 USTQ9Y2C2 406 aa23.27■■□□□ 1.31
SKI-201ENST00000378536 BHMT2Q9H2M3 363 aa23.26■■□□□ 1.31
SKI-201ENST00000378536 FAM186BQ8IYM0 893 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms