RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 CXCR5P32302 372 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 GUCY2FP51841 1108 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 CTTNQ14247 550 aaKnown RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 GRM4Q14833 912 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 LLGL1Q15334 1064 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 H2AFVQ71UI9 128 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 CCDC91Q7Z6B0 441 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 DHX40Q8IX18 779 aaKnown RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 TTC16Q8NEE8 873 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF512BQ96KM6 892 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 BARHL2Q9NY43 387 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 LRRIQ4A6NIV6 560 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 ECE2O60344 883 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 LRRN2O75325 713 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 CHRNA5P30532 468 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 VPS72Q15906 364 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 KRT26Q7Z3Y9 468 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 METTL13Q8N6R0 699 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 PCIF1Q9H4Z3 704 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 AS3MTQ9HBK9 375 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 F5H6K3 240 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 hCG_1984214I3L0E3 225 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 EBAG9O00559 213 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 PRPF6O94906 941 aaKnown RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 KLRC3Q07444 240 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 SF3A3Q12874 501 aaKnown RBP eCLIP14.5□□□□□ -0.096e-7■■■■■ 34.3
NPHP4-203ENST00000378169 UBL4BQ8N7F7 174 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF713Q8N859 430 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 DPF2Q92785 391 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 IQCDQ96DY2 449 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 NAP1L3Q99457 506 aaPredicted RBP14.5□□□□□ -0.09
NPHP4-203ENST00000378169 NDST4Q9H3R1 872 aa14.5□□□□□ -0.09
NPHP4-203ENST00000378169 ATP2A1O14983 1001 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 CASP7P55210 303 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 TTBK2Q6IQ55 1244 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 DCUN1D2Q6PH85 259 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 GADL1Q6ZQY3 521 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 NCAPG2Q86XI2 1143 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 KCNK9Q9NPC2 374 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 SH3GLB2Q9NR46 395 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 ASIC3Q9UHC3 531 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 FBXO2Q9UK22 296 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-203ENST00000378169 GOLGA6CA6NDK9 693 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 SEC31AO94979 1220 aaKnown RBP14.49□□□□□ -0.09
NPHP4-203ENST00000378169 GOLGA6DP0CG33 693 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 GRIN1Q05586 938 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 CPLX4Q7Z7G2 160 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 ARFGAP2Q8N6H7 521 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF341Q9BYN7 854 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 RIC8AQ9NPQ8 531 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 GOLGA6AQ9NYA3 693 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 HYOU1Q9Y4L1 999 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 E9PMD0 336 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 MYL1P05976 194 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 LIG4P49917 911 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 IQCB1Q15051 598 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.49□□□□□ -0.09
NPHP4-203ENST00000378169 IWS1Q96ST2 819 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 UTP11Q9Y3A2 253 aaKnown RBP14.49□□□□□ -0.09
NPHP4-203ENST00000378169 HNRNPDLO14979 420 aaKnown RBP14.49□□□□□ -0.09
NPHP4-203ENST00000378169 NDUFA10O95299 355 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 QRICH1Q2TAL8 776 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 EEPD1Q7L9B9 569 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 CCDC105Q8IYK2 499 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 FAM186BQ8IYM0 893 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 FAM133AQ8N9E0 248 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 POMGNT1Q8WZA1 660 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 DAGLAQ9Y4D2 1042 aa14.49□□□□□ -0.09
NPHP4-203ENST00000378169 SIGLEC1Q9BZZ2 1709 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 SPATA31A5Q5VU36 1347 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 SPATA31A7Q8IWB4 1347 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 FAM83BQ5T0W9 1011 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF365Q70YC5 407 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 FBXO33Q7Z6M2 555 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 TXNRD3Q86VQ6 643 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 SULF1Q8IWU6 871 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 AMFRQ9UKV5 643 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 IVLP07476 585 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 ZNF277Q9NRM2 450 aaPredicted RBP14.48□□□□□ -0.09
NPHP4-203ENST00000378169 AGTPBP1Q9UPW5 1226 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 MST1RQ04912 1400 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 ACTN4O43707 911 aaKnown RBP14.48□□□□□ -0.09
NPHP4-203ENST00000378169 MFAP3LO75121 409 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 TCP1P17987 556 aaKnown RBP14.48□□□□□ -0.09
NPHP4-203ENST00000378169 EIF4A3P38919 411 aaKnown RBP14.48□□□□□ -0.09
NPHP4-203ENST00000378169 ZBED6P86452 979 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 TOGARAM2Q6ZUX3 1019 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 SRGAP1Q7Z6B7 1085 aa14.48□□□□□ -0.09
NPHP4-203ENST00000378169 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.48□□□□□ -0.09
NPHP4-203ENST00000378169 ADGRB2O60241 1585 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 POTEB3A0JP26 581 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 POTECB2RU33 542 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 KIF4AO95239 1232 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 VPS41P49754 854 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 ATP2C1P98194 919 aaPredicted RBP14.47□□□□□ -0.09
NPHP4-203ENST00000378169 POTEBQ6S5H4 581 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 ADGRF4Q8IZF3 695 aa14.47□□□□□ -0.09
NPHP4-203ENST00000378169 HPS3Q969F9 1004 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms