RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 PRPF31Q8WWY3 499 aaKnown RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 SUCLG2Q96I99 432 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 RAB17Q9H0T7 212 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 PCDH18Q9HCL0 1135 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 PLCB1Q9NQ66 1216 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 AKR1B10O60218 316 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 JAK2O60674 1132 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 GMNNO75496 209 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 CAPN15O75808 1086 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 KCNA6P17658 529 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 MSH2P43246 934 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 MAGEA10P43363 369 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 PMS2P54278 862 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 SOGA3Q5TF21 947 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 ARL8AQ96BM9 186 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 BRD8Q9H0E9 1235 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 IGF2BP3O00425 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 MCF2LO15068 1137 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 ZBTB16Q05516 673 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 BEND3Q5T5X7 828 aa12.82□□□□□ -0.36
NPHP4-202ENST00000378161 TRMT112Q9UI30 125 aaKnown RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 CTDP1Q9Y5B0 961 aaPredicted RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 VIRMAQ69YN4 1812 aaKnown RBP12.82□□□□□ -0.36
NPHP4-202ENST00000378161 BACH1O14867 736 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 HARSP12081 509 aaKnown RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 NFKBIAP25963 317 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 PPP2R2AP63151 447 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 SLC7A5Q01650 507 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 DBNDD2Q9BQY9 259 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 METTL22Q9BUU2 404 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 GMEB1Q9Y692 573 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 ACADSP16219 412 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 LBRQ14739 615 aaKnown RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 KPNB1Q14974 876 aaKnown RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 KRT23Q9C075 422 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 MED14O60244 1454 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 F8VZ95 297 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TCP1P17987 556 aaKnown RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 IFNAR2P48551 515 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TUBA1BP68363 451 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 IGBP1P78318 339 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TLDC1Q6P9B6 456 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TUBA1AQ71U36 451 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TRPM8Q7Z2W7 1104 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 CATIPQ7Z7H3 387 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 SDR16C5Q8N3Y7 309 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 TANGO6Q9C0B7 1094 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 ARHGAP10A1A4S6 786 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 CASQ2O14958 399 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-202ENST00000378161 GCP02774 474 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 RIPK1Q13546 671 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 FAM186BQ8IYM0 893 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 MAP4K1Q92918 833 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 EBF2Q9HAK2 575 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 CROTQ9UKG9 612 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 SLC4A7Q9Y6M7 1214 aa12.81□□□□□ -0.36
NPHP4-202ENST00000378161 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 MGRN1O60291 552 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 PRPF6O94906 941 aaKnown RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 KRT4P19013 534 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 MAP3K7CLP57077 242 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ITGA7Q13683 1181 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 EAF2Q96CJ1 260 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 CCDC42Q96M95 316 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 PSMB7Q99436 277 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ETNK1Q9HBU6 452 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 SETBP1Q9Y6X0 1596 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 MGEA5O60502 916 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 WTAPQ15007 396 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ARHGEF10LQ9HCE6 1279 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 COMMD3-BMI1R4GMX3 469 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 UPP2O95045 317 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 KIF11P52732 1056 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 TMEM259Q4ZIN3 620 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ANO1Q5XXA6 986 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 IKBKGQ9Y6K9 419 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ZCCHC11Q5TAX3 1644 aaKnown RBP12.8□□□□□ -0.36
NPHP4-202ENST00000378161 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
NPHP4-202ENST00000378161 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 NOL3O60936 208 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 HSPA2P54652 639 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 ZNF790Q6PG37 636 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 UHMK1Q8TAS1 419 aaKnown RBP12.79□□□□□ -0.36
NPHP4-202ENST00000378161 EPB41L5Q9HCM4 733 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 E9PCH4 1651 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 A0A0D9SFI3 127 aa12.79□□□□□ -0.36
NPHP4-202ENST00000378161 TRIM64CA6NLI5 447 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms