RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 AKR1B10O60218 316 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 TRIM37O94972 964 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 TATP17735 454 aaPredicted RBP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 MCM7P33993 719 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 FUT2Q10981 343 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 UBE3CQ15386 1083 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 MIS18BP1Q6P0N0 1132 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 LRRC15Q8TF66 581 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 L3MBTL3Q96JM7 780 aaPredicted RBP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 BATF3Q9NR55 127 aa17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 FAM207AQ9NSI2 230 aaPredicted RBP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 IQSEC3Q9UPP2 1182 aaPredicted RBP17.28■□□□□ 0.36
CSNK1A1-202ENST00000377843 CCT8L1PA6NM43 557 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 ANKRD40Q6AI12 368 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 CPLX4Q7Z7G2 160 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 PNMA8AQ86V59 439 aaPredicted RBP17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 INPP4AQ96PE3 977 aaPredicted RBP17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 ERGIC2Q96RQ1 377 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 RNF26Q9BY78 433 aaPredicted RBP17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 NAPBQ9H115 298 aa17.27■□□□□ 0.36
CSNK1A1-202ENST00000377843 PP2D1A8MPX8 630 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 CYP27B1O15528 508 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 PJA2O43164 708 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 BMP15O95972 392 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 CTNNA1P35221 906 aaKnown RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 MAGOHP61326 146 aaKnown RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 HLTFQ14527 1009 aaKnown RBP eCLIP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 ODF2Q5BJF6 829 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 FIGNQ5HY92 759 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 MFSD6Q6ZSS7 791 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 TBC1D1Q86TI0 1168 aaPredicted RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 TAX1BP1Q86VP1 789 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 SPDYE1Q8NFV5 336 aaPredicted RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 MAGOHBQ96A72 148 aaKnown RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 SPAG5Q96R06 1193 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 PLIN2Q99541 437 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 SLC12A4Q9UP95 1085 aa17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 V9GY48 417 aaPredicted RBP17.27■□□□□ 0.35
CSNK1A1-202ENST00000377843 TJP1Q07157 1748 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 SMIM22K7EJ46 135 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 PALMO75781 387 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 STAT6P42226 847 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ALX1Q15699 326 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC57Q2TAC2 916 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 AP1ARQ63HQ0 302 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 CAPRIN2Q6IMN6 1127 aaKnown RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 CRELD2Q6UXH1 353 aaPredicted RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC26Q8TAB7 109 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 KCNMB3Q9NPA1 279 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ETAA1Q9NY74 926 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ABCC12Q96J65 1359 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 LRRC53A6NM62 1247 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 PSMA7O14818 248 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ASTE1Q2TB18 679 aaPredicted RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ZSCAN29Q8IWY8 852 aaPredicted RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC63Q8NA47 563 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 GIMAP8Q8ND71 665 aaPredicted RBP17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 NOX5Q96PH1 765 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 ARMT1Q9H993 441 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 AGAP1Q9UPQ3 857 aa17.26■□□□□ 0.35
CSNK1A1-202ENST00000377843 PHRF1Q9P1Y6 1649 aaKnown RBP17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 UPP2O95045 317 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 MBD4O95243 580 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 SNX1Q13596 522 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 P3H4Q92791 437 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 ISCUQ9H1K1 167 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 SIK3Q9Y2K2 1263 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 MYH7P12883 1935 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 GSG1L2A8MUP6 293 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 EVA1CP58658 441 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 BIRC3Q13489 604 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 THEMIS2Q5TEJ8 643 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 PIK3AP1Q6ZUJ8 805 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 TTC5Q8N0Z6 440 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC155Q8N6L0 562 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 KRT23Q9C075 422 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 FBXL5Q9UKA1 691 aa17.25■□□□□ 0.35
CSNK1A1-202ENST00000377843 RIC1Q4ADV7 1423 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 DIAPH2O60879 1101 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 GRIPAP1Q4V328 841 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 RRAGAQ7L523 313 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 CNNM2Q9H8M5 875 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 CAMTA1Q9Y6Y1 1673 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 RHOBTB3O94955 611 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 VEGFAP15692 232 aaPredicted RBP17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 PHKG2P15735 406 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 RIPK1Q13546 671 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 TMED8Q6PL24 325 aaPredicted RBP17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 PRCCQ92733 491 aaPredicted RBP17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
CSNK1A1-202ENST00000377843 DISC1Q9NRI5 854 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms