RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 PGM5Q15124 567 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 ANKRD33Q7Z3H0 272 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 SAMD3Q8N6K7 520 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 ZFP91Q96JP5 570 aaPredicted RBP13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 BRPF3Q9ULD4 1205 aa13.35□□□□□ -0.27
SMARCE1-203ENST00000377808 GH1P01241 217 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 PSMA5P28066 241 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 GHRHRQ02643 423 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 APOBRQ0VD83 1088 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 USP17L6PQ6QN14 398 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 BRF1Q92994 677 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 PPP1R12CQ9BZL4 782 aa13.34□□□□□ -0.27
SMARCE1-203ENST00000377808 LTBP2Q14767 1821 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 RANBP2P49792 3224 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 KIAA0355O15063 1070 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 ITGB8P26012 769 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 CDK7P50613 346 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 FAM126BQ8IXS8 530 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 PPP1R13LQ8WUF5 828 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 AFG1LQ8WV93 481 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 KCNB2Q92953 911 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 LRCH3Q96II8 777 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 PSTPIP2Q9H939 334 aa13.33□□□□□ -0.28
SMARCE1-203ENST00000377808 CNTNAP5Q8WYK1 1306 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 NAPAP54920 295 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 FPGSQ05932 587 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 UBE2SQ16763 222 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 CCDC62Q6P9F0 684 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 DHX37Q8IY37 1157 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 RTEL1Q9NZ71 1219 aa13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 DDX41Q9UJV9 622 aaKnown RBP13.32□□□□□ -0.28
SMARCE1-203ENST00000377808 A6NJR5 290 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 B4GALT4O60513 344 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 KPNA6O60684 536 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 TIMP1P01033 207 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 MMP3P08254 477 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 ARHGAP1Q07960 439 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 WWC2Q6AWC2 1192 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 VSIG10LQ86VR7 867 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 TRPV6Q9H1D0 765 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 TBX21Q9UL17 535 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
SMARCE1-203ENST00000377808 KIAA1217Q5T5P2 1943 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 CCDC196A0A1B0GTZ2 297 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 SPDYE3A6NKU9 549 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 MEIS2O14770 477 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 GGPS1O95749 300 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 CDC27P30260 824 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 LAMC2Q13753 1193 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 SHHQ15465 462 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 DGKDQ16760 1214 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 KCNV1Q6PIU1 500 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 TMEM199Q8N511 208 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 SLC43A3Q8NBI5 491 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 USP26Q9BXU7 913 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 SEZ6LQ9BYH1 1024 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 ALDH8A1Q9H2A2 487 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 HIPK3Q9H422 1215 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 TRMT13Q9NUP7 481 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 NOD1Q9Y239 953 aa13.3□□□□□ -0.28
SMARCE1-203ENST00000377808 LAMA3Q16787 3333 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 RGS20O76081 388 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 CD4P01730 458 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 ZNF286BP0CG31 522 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 CYP2C18P33260 490 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 ADD1P35611 737 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 LRIT3Q3SXY7 679 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 MFSD5Q6N075 450 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 RUFY3Q7L099 469 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 PPTC7Q8NI37 304 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 RNPC3Q96LT9 517 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 UPF3BQ9BZI7 483 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 EHMT1Q9H9B1 1298 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
SMARCE1-203ENST00000377808 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 EPB41L2O43491 1005 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 STAM2O75886 525 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
SMARCE1-203ENST00000377808 CYP2C9P11712 490 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms