RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 RSPH14Q9UHP6 348 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 GOLGA8IPA6NC78 632 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 GOLGA8JA6NMD2 632 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 SLC37A4O43826 429 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ORC4O43929 436 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 MOCS3O95396 460 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 DLATP10515 647 aaKnown RBP12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ECE1P42892 770 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 CLCN6P51797 869 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 GRM4Q14833 912 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 KIAA0753Q2KHM9 967 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ODR4Q5SWX8 454 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF384Q8TF68 577 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 PPP1R16BQ96T49 567 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ANO3Q9BYT9 981 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 PDHBP11177 359 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 DDR1Q08345 913 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 BIRC3Q13489 604 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 CEP112Q8N8E3 955 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF526Q8TF50 670 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-203ENST00000376619 MRRFQ96E11 262 aaKnown RBP12.31□□□□□ -0.44
HDAC6-203ENST00000376619 MAD2L2Q9UI95 211 aa12.31□□□□□ -0.44
HDAC6-203ENST00000376619 GOLGA6L10A6NI86 522 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PLA2G4BP0C869 781 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 KRT5P13647 590 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 EIF4A3P38919 411 aaKnown RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 APBA1Q02410 837 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 IFFO1Q0D2I5 559 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 U2AF1L4Q8WU68 220 aaKnown RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 MASTLQ96GX5 879 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF341Q9BYN7 854 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 ARMCX3Q9UH62 379 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TUBE1Q9UJT0 475 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 SAR1BQ9Y6B6 198 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 MFAP3LO75121 409 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 OAS2P29728 719 aaKnown RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 CDC25BP30305 580 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TRAPPC10P48553 1259 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 GOLPH3Q9H4A6 298 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 LTN1O94822 1766 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 DDTLA6NHG4 134 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PCP11498 1178 aaKnown RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 HPDP32754 393 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 ASPRV1Q53RT3 343 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 FAM178BQ8IXR5 827 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TAB3Q8N5C8 712 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PARD6BQ9BYG5 372 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TMEM39BQ9GZU3 492 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 SUGCTQ9HAC7 445 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 DUSP10Q9Y6W6 482 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TOPAZ1Q8N9V7 1692 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PNMA6FA0A0J9YX94 578 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 NCK2O43639 380 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 NDUFA10O95299 355 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 RCSD1Q6JBY9 416 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 SND1Q7KZF4 910 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PROM2Q8N271 834 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 TC2NQ8N9U0 490 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 BANK1Q8NDB2 785 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 PRMT6Q96LA8 375 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-203ENST00000376619 NUDT12Q9BQG2 462 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 MLXIPQ9HAP2 919 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 MYO6Q9UM54 1294 aa12.3□□□□□ -0.44
HDAC6-203ENST00000376619 STXBP3O00186 592 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 CETN1Q12798 172 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 GPATCH4Q5T3I0 446 aaKnown RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 EMILIN3Q9NT22 766 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 WDR19Q8NEZ3 1342 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 GSTTP1A0A1W2PQM5 241 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 PLEKP08567 350 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 PNMA6AP0CW24 399 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 XRCC5P13010 732 aaKnown RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 ACER1Q8TDN7 264 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 UBE2Q2Q8WVN8 375 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 OSBPL5Q9H0X9 879 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 CHORDC1Q9UHD1 332 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-203ENST00000376619 ZBTB5O15062 677 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 ZNF185O15231 689 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 CCNE1P24864 410 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 VPS41P49754 854 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 SFMBT2Q5VUG0 894 aa12.29□□□□□ -0.44
HDAC6-203ENST00000376619 IQCEQ6IPM2 695 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms