RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 IPO11Q9UI26 975 aaKnown RBP14.91□□□□□ -0.02
COL4A1-201ENST00000375820 MTMR6Q9Y217 621 aa14.91□□□□□ -0.02
COL4A1-201ENST00000375820 F5H423 210 aaPredicted RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 GSTA4O15217 222 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 KRT1P04264 644 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 ZNF274Q96GC6 653 aaPredicted RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 INTS9Q9NV88 658 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 CFLARO15519 480 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 CPP00450 1065 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 LMNB1P20700 586 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 DDIT3P35638 169 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 CERS3Q8IU89 383 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 NLRP7Q8WX94 980 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 COA7Q96BR5 231 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 CALN1Q9BXU9 219 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 N4BP1O75113 896 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 SMAD1Q15797 465 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 CDO1Q16878 200 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 ADCK5Q3MIX3 580 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 MIGA2Q7L4E1 593 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 PIP4K2CQ8TBX8 421 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 PSPC1Q8WXF1 523 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 SYNDIG1LA6NDD5 238 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 TMEM259Q4ZIN3 620 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 TRMT10CQ7L0Y3 403 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 TCP11Q8WWU5 503 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 MYO1FO00160 1098 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 PDIA3P30101 505 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 MFAP3P55082 362 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 DARS2Q6PI48 645 aaKnown RBP14.9□□□□□ -0.02
COL4A1-201ENST00000375820 ACRBPQ8NEB7 543 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 ANKRD36BP1Q96IX9 119 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 NRBP2Q9NSY0 501 aa14.9□□□□□ -0.02
COL4A1-201ENST00000375820 ABCA10Q8WWZ4 1543 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 GOLGA8IPA6NC78 632 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 GOLGA8JA6NMD2 632 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 PFKFB2O60825 505 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 SNCBQ16143 134 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 SNX25Q9H3E2 840 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 KMT5AQ9NQR1 393 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 MED23Q9ULK4 1368 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 SGO2Q562F6 1265 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 SPATA1Q5VX52 437 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 FAM160B1Q5W0V3 765 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 ANGPTL8Q6UXH0 198 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 MCF2L2Q86YR7 1114 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 CSRNP1Q96S65 589 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-201ENST00000375820 UBE2SQ16763 222 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 KCTD6Q8NC69 237 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 AP1M1Q9BXS5 423 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-201ENST00000375820 TSR3Q9UJK0 312 aaKnown RBP14.89□□□□□ -0.03
COL4A1-201ENST00000375820 PFDN6O15212 129 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 TNFAIP1Q13829 316 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 NT5C1BQ96P26 610 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 GPR101Q96P66 508 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-201ENST00000375820 NOC2LQ9Y3T9 749 aaKnown RBP14.89□□□□□ -0.03
COL4A1-201ENST00000375820 ASXL2Q76L83 1435 aa14.89□□□□□ -0.03
COL4A1-201ENST00000375820 POLR2BP30876 1174 aaKnown RBP14.88□□□□□ -0.03
COL4A1-201ENST00000375820 RAB44Q7Z6P3 723 aaPredicted RBP14.88□□□□□ -0.03
COL4A1-201ENST00000375820 HSPH1Q92598 858 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 SOWAHDA6NJG2 315 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 CMA1P23946 247 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 MTERF2Q49AM1 385 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 GOLGA5Q8TBA6 731 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 MTRQ99707 1265 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 HAUS8Q9BT25 410 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 Q9H521 79 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 LARSQ9P2J5 1176 aaKnown RBP14.88□□□□□ -0.03
COL4A1-201ENST00000375820 LRFN2Q9ULH4 789 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 SFMBT1Q9UHJ3 866 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
COL4A1-201ENST00000375820 PRKAB2O43741 272 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 ZWILCHQ9H900 591 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 SPTLC3Q9NUV7 552 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 HACD3Q9P035 362 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 DPY19L2Q6NUT2 758 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 RSBN1LQ6PCB5 846 aaPredicted RBP14.88□□□□□ -0.03
COL4A1-201ENST00000375820 TMTC3Q6ZXV5 915 aa14.88□□□□□ -0.03
COL4A1-201ENST00000375820 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 EEF1B2P24534 225 aaKnown RBP14.87□□□□□ -0.03
COL4A1-201ENST00000375820 SPOPLQ6IQ16 392 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 HIPK4Q8NE63 616 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 ABTB1Q969K4 478 aaPredicted RBP14.87□□□□□ -0.03
COL4A1-201ENST00000375820 TRIM4Q9C037 500 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 STX1BP61266 288 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 C11orf57Q6ZUT1 292 aaPredicted RBP14.87□□□□□ -0.03
COL4A1-201ENST00000375820 SZRD1Q7Z422 152 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 PIGSQ96S52 555 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 CYP2D7A0A087X1C5 515 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 PPFIA2O75334 1257 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 IL9RQ01113 521 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 LARP4BQ92615 738 aaKnown RBP14.87□□□□□ -0.03
COL4A1-201ENST00000375820 USP44Q9H0E7 712 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 SFI1A8K8P3 1242 aa14.87□□□□□ -0.03
COL4A1-201ENST00000375820 ZNF18P17022 549 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms