RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 TRIP12Q14669 1992 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-202ENST00000375271 ARIH2O95376 493 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 HSPD1P10809 573 aaKnown RBP16.5■□□□□ 0.23
PTCH1-202ENST00000375271 SSTR3P32745 418 aaPredicted RBP16.5■□□□□ 0.23
PTCH1-202ENST00000375271 FAM117BQ6P1L5 589 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 SESTD1Q86VW0 696 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 LRFN3Q9BTN0 628 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 UBA5Q9GZZ9 404 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
PTCH1-202ENST00000375271 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
PTCH1-202ENST00000375271 CCDC171Q6TFL3 1326 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 A0A0D9SFI3 127 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 ZNF213O14771 459 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 GJB5O95377 273 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 CKBP12277 381 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 EIF2AK2P19525 551 aaKnown RBP16.49■□□□□ 0.23
PTCH1-202ENST00000375271 PSEN2P49810 448 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 NT5C2P49902 561 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 DEFB103AP81534 67 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 LAMC2Q13753 1193 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 PNMA1Q8ND90 353 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 FAM227BQ96M60 508 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
PTCH1-202ENST00000375271 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
PTCH1-202ENST00000375271 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 LCHNA4D1U4 455 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 ARHGEF15O94989 841 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 AMHP03971 560 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 ARHGAP1Q07960 439 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 PTK7Q13308 1070 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 MFSD10Q14728 455 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 PTPROQ16827 1216 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 CSPP1Q1MSJ5 1256 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 KIAA0753Q2KHM9 967 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 TMCO2Q7Z6W1 182 aaPredicted RBP16.48■□□□□ 0.23
PTCH1-202ENST00000375271 FBXO11Q86XK2 927 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 UBE2ZQ9H832 354 aaPredicted RBP16.48■□□□□ 0.23
PTCH1-202ENST00000375271 HDAC6Q9UBN7 1215 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 PCDHB15Q9Y5E8 787 aa16.48■□□□□ 0.23
PTCH1-202ENST00000375271 EIF3JO75822 258 aaKnown RBP16.47■□□□□ 0.23
PTCH1-202ENST00000375271 CFBP00751 764 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 ZNF286BP0CG31 522 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 SNHG28P0DPA3 235 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 NMIQ13287 307 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-202ENST00000375271 CCDC62Q6P9F0 684 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 FBXO22Q8NEZ5 403 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 PPTC7Q8NI37 304 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 SYTL5Q8TDW5 730 aaPredicted RBP16.47■□□□□ 0.23
PTCH1-202ENST00000375271 TAAR1Q96RJ0 339 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 INSL6Q9Y581 213 aa16.47■□□□□ 0.23
PTCH1-202ENST00000375271 LINC01553A4QN01 128 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 FAM86C2PA6NEL3 165 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 CXCL10P02778 98 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 PARP1P09874 1014 aaKnown RBP16.46■□□□□ 0.23
PTCH1-202ENST00000375271 KCNA5P22460 613 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 PDE1AP54750 535 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 ERVK-21P61565 698 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 RBL2Q08999 1139 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 KCNV1Q6PIU1 500 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 EP400NLQ6ZTU2 488 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 ADGRF4Q8IZF3 695 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 CPVLQ9H3G5 476 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 VAT1LQ9HCJ6 419 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 FAM50BQ9Y247 325 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 MYH6P13533 1939 aa16.46■□□□□ 0.23
PTCH1-202ENST00000375271 KIAA1217Q5T5P2 1943 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 LPXNO60711 386 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 GPR37L1O60883 481 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 NBNO60934 754 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 KDM4AO75164 1064 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 LGR5O75473 907 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 MYCLP12524 364 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-202ENST00000375271 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
PTCH1-202ENST00000375271 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 DHX38Q92620 1227 aaKnown RBP16.45■□□□□ 0.22
PTCH1-202ENST00000375271 KAT2BQ92831 832 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 SPATA33Q96N06 139 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 SUGCTQ9HAC7 445 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 SIP14410 1827 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 NEDD4P46934 1319 aa16.45■□□□□ 0.22
PTCH1-202ENST00000375271 F2P00734 622 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 NR3C2P08235 984 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
PTCH1-202ENST00000375271 THPOP40225 353 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 TRAF1Q13077 416 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 QRICH1Q2TAL8 776 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 PUS10Q3MIT2 529 aaKnown RBP16.44■□□□□ 0.22
PTCH1-202ENST00000375271 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 ZNF618Q5T7W0 954 aa16.44■□□□□ 0.22
PTCH1-202ENST00000375271 SPRED2Q7Z698 418 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms