RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 POTEEQ6S8J3 1075 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 NELFBQ8WX92 580 aa7.16□□□□□ -1.26
UBR4-204ENST00000375254 RPAP3Q9H6T3 665 aaPredicted RBP7.16□□□□□ -1.26
UBR4-204ENST00000375254 SEC31AO94979 1220 aaKnown RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 INHBAP08476 426 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 POTEIP0CG38 1075 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 ITGA9Q13797 1035 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 WASHC2DQ5SRD0 308 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 CAPN11Q9UMQ6 739 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 LRCH1Q9Y2L9 728 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 STX7O15400 261 aaKnown RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 SLC12A2P55011 1212 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 KRT73Q86Y46 540 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 VCPKMTQ9H867 229 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 STOML2Q9UJZ1 356 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 KCNA3P22001 575 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 TSR2Q969E8 191 aaKnown RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 DHTKD1Q96HY7 919 aaPredicted RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 ZBED2Q9BTP6 218 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 FCHO2Q0JRZ9 810 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 GEN1Q17RS7 908 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 TLK2Q86UE8 772 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 MTERF3Q96E29 417 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 FOXP3Q9BZS1 431 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 ATP6V1HQ9UI12 483 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 LONP2Q86WA8 852 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 ZNF274Q96GC6 653 aaPredicted RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 G3BP2Q9UN86 482 aaKnown RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 POTEFA5A3E0 1075 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 CLPTM1O96005 669 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 ARID5AQ03989 594 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 KLHL25Q9H0H3 589 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 KRT82Q9NSB4 513 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 UBA2Q9UBT2 640 aaPredicted RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 SPG7Q9UQ90 795 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 PNMA8CA0A1B0GUJ8 204 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 IFIT1P09914 478 aaKnown RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 ANXA13P27216 316 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 UAP1Q16222 522 aaPredicted RBP7.15□□□□□ -1.26
UBR4-204ENST00000375254 FBXW10Q5XX13 1052 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 BEST2Q8NFU1 509 aa7.15□□□□□ -1.26
UBR4-204ENST00000375254 IQANK1A0A1B0GTG1 560 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 HMOX2P30519 316 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 RECQLP46063 649 aaPredicted RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 GALNT17Q6IS24 598 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 PM20D2Q8IYS1 436 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 SLC4A7Q9Y6M7 1214 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 CCDC78A2IDD5 438 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 POLR2DO15514 142 aaKnown RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 CCDC90BQ9GZT6 254 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 MOV10Q9HCE1 1003 aaKnown RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 HPS5Q9UPZ3 1129 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 TYW1BQ6NUM6 668 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 Q6ZUG5 572 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 TTLL11Q8NHH1 800 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 CCT7Q99832 543 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 PLGRKTQ9HBL7 147 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 FAM187AA6NFU0 413 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 DNALI1O14645 258 aaPredicted RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 KRT37O76014 449 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 AARSP49588 968 aaKnown RBP eCLIP7.15□□□□□ -1.274e-7■■□□□ 12.8
UBR4-204ENST00000375254 MYBPC2Q14324 1141 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 HDDC2Q7Z4H3 204 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 PCGF5Q86SE9 256 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 CNPY3Q9BT09 278 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 HNRNPCL2B2RXH8 293 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 M0R3G1 203 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 SUPT3HO75486 399 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 MLH1P40692 756 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 TAB1Q15750 504 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 NCAPH2Q6IBW4 605 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 TMEM87BQ96K49 555 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 PRPF18Q99633 342 aaKnown RBP7.15□□□□□ -1.27
UBR4-204ENST00000375254 LZTS2Q9BRK4 669 aa7.15□□□□□ -1.27
UBR4-204ENST00000375254 ASNA1O43681 348 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 NR1I2O75469 434 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 RSAD2Q8WXG1 361 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 SNX25Q9H3E2 840 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 TRIM74Q86UV6 250 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 TRIM73Q86UV7 250 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 PDE9AO76083 593 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 PTK2BQ14289 1009 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 KCNB1Q14721 858 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 RMDN1Q96DB5 314 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 C19orf60Q96EN9 201 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 GORASP1Q9BQQ3 440 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 L2HGDHQ9H9P8 463 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 IKBIPQ70UQ0 350 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 PDZD4Q76G19 769 aaPredicted RBP7.14□□□□□ -1.27
UBR4-204ENST00000375254 PLD3Q8IV08 490 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 CUEDC2Q9H467 287 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 MPP6Q9NZW5 540 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 FOSL1P15407 271 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 ZBED6P86452 979 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 CTNNAL1Q9UBT7 734 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 FSBPO95073 299 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 DACH2Q96NX9 599 aa7.14□□□□□ -1.27
UBR4-204ENST00000375254 TRIM45Q9H8W5 580 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms