RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 SYDE2Q5VT97 1194 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 CALR3Q96L12 384 aaKnown RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 MMTAG2Q9BU76 263 aaKnown RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 NT5C3AQ9H0P0 336 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBR4-202ENST00000375224 FAM196BA6NMK8 535 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 SLC37A4O43826 429 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 CCNE1P24864 410 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 BTNL9Q6UXG8 535 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 FBXO11Q86XK2 927 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 LARP4BQ92615 738 aaKnown RBP9.16□□□□□ -0.94
UBR4-202ENST00000375224 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 CYP3A7-CYP3A51PA0A087WV96 503 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 TEX33O43247 280 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 GDF11O95390 407 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 CYP3A7P24462 503 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 IKQ13123 557 aaPredicted RBP9.16□□□□□ -0.94
UBR4-202ENST00000375224 PSMD2Q13200 908 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 GRB10Q13322 594 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 TTC31Q49AM3 519 aaPredicted RBP9.16□□□□□ -0.94
UBR4-202ENST00000375224 TMEM139Q8IV31 216 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 SNX29Q8TEQ0 813 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 PCDHA12Q9UN75 941 aa9.16□□□□□ -0.94
UBR4-202ENST00000375224 H0YHG0 523 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 NDUFB10O96000 172 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 GH2P01242 217 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 ADKP55263 362 aaKnown RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 SARNPP82979 210 aaKnown RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 BIRC2Q13490 618 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 UNC13DQ70J99 1090 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 SIAH1Q8IUQ4 282 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 TXLNBQ8N3L3 684 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 MTMR14Q8NCE2 650 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 AGBL3Q8NEM8 1001 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 ANO3Q9BYT9 981 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 GOPCQ9HD26 462 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 BMP2KQ9NSY1 1161 aaPredicted RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 PHLPP2Q6ZVD8 1323 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 ETF1P62495 437 aaKnown RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 RAD54LQ92698 747 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 P2RX5Q93086 422 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 GMLQ99445 158 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 SH2D4AQ9H788 454 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 ZNF70Q9UC06 446 aaPredicted RBP9.15□□□□□ -0.94
UBR4-202ENST00000375224 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.94
UBR4-202ENST00000375224 A0A1W2PQC6 194 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 PSMD14O00487 310 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 TBX3O15119 743 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 TMEM119Q4V9L6 283 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 DNAJC21Q5F1R6 531 aaKnown RBP9.15□□□□□ -0.95
UBR4-202ENST00000375224 RPAINQ86UA6 219 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 NIM1KQ8IY84 436 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 MBOAT7Q96N66 472 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 PNMA5Q96PV4 448 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 VPS16Q9H269 839 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 MED4Q9NPJ6 270 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 MAPK8IP1Q9UQF2 711 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 PPP2R2CQ9Y2T4 447 aa9.15□□□□□ -0.95
UBR4-202ENST00000375224 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 MYO1CO00159 1063 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 EDIL3O43854 480 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TBC1D12O60347 775 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 MFAP3LO75121 409 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 CCT6AP40227 531 aaKnown RBP9.14□□□□□ -0.95
UBR4-202ENST00000375224 GYS2P54840 703 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 RBL2Q08999 1139 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 PPP2R5AQ15172 486 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 SPDYE2Q495Y8 402 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 HYIQ5T013 277 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 SGSM3Q96HU1 749 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
UBR4-202ENST00000375224 BLOC1S4Q9NUP1 217 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 RGS17Q9UGC6 210 aaPredicted RBP9.14□□□□□ -0.95
UBR4-202ENST00000375224 ZNRF3Q9ULT6 936 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TCP10L2B9ZVM9 353 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 DNM2P50570 870 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 UBXN1Q04323 297 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TTI2Q6NXR4 508 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 FOXR2Q6PJQ5 311 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 FAM83AQ86UY5 434 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TMTC1Q8IUR5 882 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 REXO1L1PQ8IX06 675 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 CSGALNACT2Q8N6G5 542 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 FAM212AQ96EL1 285 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 TAB2Q9NYJ8 693 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 LGALS16A8MUM7 142 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L15C9J2P7 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L13C9JLJ4 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L11C9JVI0 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L18D6R9N7 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L22D6RA61 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L17D6RBQ6 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L19D6RCP7 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 USP17L20D6RJB6 530 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 RAD17O75943 681 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 CCDC175P0C221 793 aa9.14□□□□□ -0.95
UBR4-202ENST00000375224 SLURP2P0DP57 97 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms