RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CLK2P49760 499 aaKnown RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 POTEBQ6S5H4 581 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 KIFC2Q96AC6 838 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 DUSP9Q99956 384 aaKnown RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 ZBTB7AO95365 584 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 SLU7O95391 586 aaKnown RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 FXR2P51116 673 aaKnown RBP eCLIP20.4■□□□□ 0.86
RXRB-202ENST00000374685 IRX3P78415 501 aaPredicted RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 CCDC93Q567U6 631 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 SYDE2Q5VT97 1194 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 RSBN1LQ6PCB5 846 aaPredicted RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 C7orf25Q9BPX7 421 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 AMNQ9BXJ7 453 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 FAM83BQ5T0W9 1011 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 CYP2W1Q8TAV3 490 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 CNOT6LQ96LI5 555 aaKnown RBP20.4■□□□□ 0.86
RXRB-202ENST00000374685 TUBGCP2Q9BSJ2 902 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 CUEDC2Q9H467 287 aa20.4■□□□□ 0.86
RXRB-202ENST00000374685 SPDYE3A6NKU9 549 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 CFBP00751 764 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 KCNJ6P48051 423 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 SF3B2Q13435 895 aaKnown RBP20.39■□□□□ 0.85
RXRB-202ENST00000374685 ERCC6LQ2NKX8 1250 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 CNGA4Q8IV77 575 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 SUPT20HQ8NEM7 779 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 RAD54LQ92698 747 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 KCND1Q9NSA2 647 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 ZNF70Q9UC06 446 aaPredicted RBP20.39■□□□□ 0.85
RXRB-202ENST00000374685 MEIS2O14770 477 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 CCDC175P0C221 793 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 NCAPH2Q6IBW4 605 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 PPP1R18Q6NYC8 613 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 CNNM4Q6P4Q7 775 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 TBC1D5Q92609 795 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 MKL1Q969V6 931 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 CHP1Q99653 195 aa20.39■□□□□ 0.85
RXRB-202ENST00000374685 SMCHD1A6NHR9 2005 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 TTC26A0AVF1 554 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ABL1P00519 1130 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 CYP4A11Q02928 519 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 PANX2Q96RD6 677 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 SLF1Q9BQI6 1058 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ZSWIM4Q9H7M6 989 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ABHD10Q9NUJ1 306 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.38■□□□□ 0.858e-7■□□□□ 9.2
RXRB-202ENST00000374685 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 CCNE1P24864 410 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ZNF76P36508 570 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ARHGAP4P98171 946 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 PPP4R3AQ6IN85 833 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 NELFCDQ8IXH7 590 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 MTMR8Q96EF0 704 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 MRIQ9BWK5 157 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 GLIS2Q9BZE0 524 aaPredicted RBP20.38■□□□□ 0.85
RXRB-202ENST00000374685 SEMA6BQ9H3T3 888 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 TFR2Q9UP52 801 aa20.38■□□□□ 0.85
RXRB-202ENST00000374685 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
RXRB-202ENST00000374685 POTEFA5A3E0 1075 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 KRT18P05783 430 aaKnown RBP20.37■□□□□ 0.85
RXRB-202ENST00000374685 POTEIP0CG38 1075 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 CASQ1P31415 396 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 ERVK-24P63145 666 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 TBC1D8BQ0IIM8 1120 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 POTEGQ6S5H5 508 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 MB21D1Q8N884 522 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 NOC4LQ9BVI4 516 aaKnown RBP20.37■□□□□ 0.85
RXRB-202ENST00000374685 QSER1Q2KHR3 1735 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 MYL1P05976 194 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 TRIM21P19474 475 aaKnown RBP20.37■□□□□ 0.85
RXRB-202ENST00000374685 ZNF397Q8NF99 534 aaPredicted RBP20.37■□□□□ 0.85
RXRB-202ENST00000374685 HDAC9Q9UKV0 1011 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 PRR12Q9ULL5 1215 aa20.37■□□□□ 0.85
RXRB-202ENST00000374685 ENTPD3O75355 529 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 FKBP1AP62942 108 aaKnown RBP20.36■□□□□ 0.85
RXRB-202ENST00000374685 NBPF9Q3BBW0 867 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 DHTKD1Q96HY7 919 aaPredicted RBP20.36■□□□□ 0.85
RXRB-202ENST00000374685 CARD6Q9BX69 1037 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 FBXO28Q9NVF7 368 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 ADGRG1Q9Y653 693 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 LRRC10BA6NIK2 292 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 FGFBP2Q9BYJ0 223 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 MAGEF1Q9HAY2 307 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 SIPA1L1O43166 1804 aa20.36■□□□□ 0.85
RXRB-202ENST00000374685 LGALS16A8MUM7 142 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 CHMP2AO43633 222 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 MNS1Q8NEH6 495 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 EPC1Q9H2F5 836 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 STK17AQ9UEE5 414 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 BICDL2A1A5D9 508 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 FAM86B1E9PN63 330 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 FAM86B2P0C5J1 330 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 PDIA5Q14554 519 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
RXRB-202ENST00000374685 STAT2P52630 851 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms