RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 OR6J1Q8NGC5 347 aa24.47■■□□□ 1.51
TMEM54-202ENST00000373463 PHKBQ93100 1093 aa24.47■■□□□ 1.51
TMEM54-202ENST00000373463 STARD7Q9NQZ5 370 aa24.47■■□□□ 1.51
TMEM54-202ENST00000373463 DDX41Q9UJV9 622 aaKnown RBP24.47■■□□□ 1.51
TMEM54-202ENST00000373463 GRIN2DO15399 1336 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 CCDC196A0A1B0GTZ2 297 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 NKRFO15226 690 aaKnown RBP eCLIP24.46■■□□□ 1.51
TMEM54-202ENST00000373463 TLE2Q04725 743 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 ARHGAP1Q07960 439 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 PFKFB3Q16875 520 aaPredicted RBP24.46■■□□□ 1.51
TMEM54-202ENST00000373463 SMARCC2Q8TAQ2 1214 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 ZNF274Q96GC6 653 aaPredicted RBP24.46■■□□□ 1.51
TMEM54-202ENST00000373463 BARHL2Q9NY43 387 aa24.46■■□□□ 1.51
TMEM54-202ENST00000373463 COLQQ9Y215 455 aaPredicted RBP24.46■■□□□ 1.51
TMEM54-202ENST00000373463 ELP1O95163 1332 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 ADAMTS3O15072 1205 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 CCND2P30279 289 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 CDK7P50613 346 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 GLT1D1Q96MS3 346 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 ALDH8A1Q9H2A2 487 aaPredicted RBP24.45■■□□□ 1.5
TMEM54-202ENST00000373463 MYH7BA7E2Y1 1941 aa24.45■■□□□ 1.5
TMEM54-202ENST00000373463 PRPF3O43395 683 aaKnown RBP24.44■■□□□ 1.5
TMEM54-202ENST00000373463 SCG2P13521 617 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 IFNAR1P17181 557 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 NAPAP54920 295 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 PPP1R18Q6NYC8 613 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 CHRDL2Q6WN34 429 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 SH3RF1Q7Z6J0 888 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 CUL5Q93034 780 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 RIC8AQ9NPQ8 531 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 PDLIM7Q9NR12 457 aa24.44■■□□□ 1.5
TMEM54-202ENST00000373463 DOCK5Q9H7D0 1870 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 A6NJR5 290 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 hCG_1984214I3L0E3 225 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 PURAQ00577 322 aaKnown RBP24.43■■□□□ 1.5
TMEM54-202ENST00000373463 SP2Q02086 613 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 SEMA3FQ13275 785 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 ANKRD33Q7Z3H0 272 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 ZNF713Q8N859 430 aaPredicted RBP24.43■■□□□ 1.5
TMEM54-202ENST00000373463 SLC43A3Q8NBI5 491 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 INPP4AQ96PE3 977 aaPredicted RBP24.43■■□□□ 1.5
TMEM54-202ENST00000373463 GDF15Q99988 308 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 TPCN1Q9ULQ1 816 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 MRVI1Q9Y6F6 885 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 SCN10AQ9Y5Y9 1956 aa24.43■■□□□ 1.5
TMEM54-202ENST00000373463 AK2P54819 239 aa24.42■■□□□ 1.5
TMEM54-202ENST00000373463 PSMC6P62333 389 aa24.42■■□□□ 1.5
TMEM54-202ENST00000373463 STK3Q13188 491 aa24.42■■□□□ 1.5
TMEM54-202ENST00000373463 PCNX4Q63HM2 1172 aa24.42■■□□□ 1.5
TMEM54-202ENST00000373463 RNF26Q9BY78 433 aaPredicted RBP24.42■■□□□ 1.5
TMEM54-202ENST00000373463 BCAS3Q9H6U6 928 aa24.42■■□□□ 1.5
TMEM54-202ENST00000373463 A0A0U1RQG5 324 aaPredicted RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 TRIM43BA6NCK2 446 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 PQBP1O60828 265 aaKnown RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 GH1P01241 217 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 MAGEA10P43363 369 aaPredicted RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 CLK2P49760 499 aaKnown RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 CPT1AP50416 773 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 AFG1LQ8WV93 481 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 TRIM43Q96BQ3 446 aaPredicted RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 RTEL1Q9NZ71 1219 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 RBM27Q9P2N5 1060 aaKnown RBP24.41■■□□□ 1.5
TMEM54-202ENST00000373463 PCDHA6Q9UN73 950 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 PCDHA8Q9Y5H6 950 aa24.41■■□□□ 1.5
TMEM54-202ENST00000373463 SMCO2A6NFE2 343 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 ARVCFO00192 962 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 UBA1P22314 1058 aaKnown RBP24.4■■□□□ 1.5
TMEM54-202ENST00000373463 ITGB8P26012 769 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 FAAP100Q0VG06 881 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 EMID1Q96A84 441 aaPredicted RBP24.4■■□□□ 1.5
TMEM54-202ENST00000373463 PGBD1Q96JS3 809 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 TOX2Q96NM4 488 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 KIF2CQ99661 725 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 SLC26A6Q9BXS9 759 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 TMEM260Q9NX78 707 aa24.4■■□□□ 1.5
TMEM54-202ENST00000373463 RANBP2P49792 3224 aaKnown RBP24.39■■□□□ 1.5
TMEM54-202ENST00000373463 ZEB2O60315 1214 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 EIF5BO60841 1220 aaKnown RBP24.39■■□□□ 1.49
TMEM54-202ENST00000373463 DTNBO60941 627 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 CABYRO75952 493 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 MMP3P08254 477 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 MYL3P08590 195 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 ICAM3P32942 547 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 ADCY7P51828 1080 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 SCRN1Q12765 414 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 FAM126BQ8IXS8 530 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 VTI1AQ96AJ9 217 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 POLR3EQ9NVU0 708 aa24.39■■□□□ 1.49
TMEM54-202ENST00000373463 ESYT2A0FGR8 921 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 SPATA31C2B4DYI2 1134 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 SORBS3O60504 671 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 STAM2O75886 525 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 LARGE1O95461 756 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 ITGA7Q13683 1181 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 MYSM1Q5VVJ2 828 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 XRRA1Q6P2D8 792 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 PPP1R13LQ8WUF5 828 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 ZMYND12Q9H0C1 365 aa24.38■■□□□ 1.49
TMEM54-202ENST00000373463 SPDYE3A6NKU9 549 aa24.37■■□□□ 1.49
TMEM54-202ENST00000373463 PFKFB2O60825 505 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms