RNA–Protein interactions for RNA: ENST00000372056.8

LDB3-203, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-203ENST00000372056 CCDC174Q6PII3 467 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CHST13Q8NET6 341 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 STAMQ92783 540 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 XPO4Q9C0E2 1151 aaKnown RBP14.59□□□□□ -0.07
LDB3-203ENST00000372056 FBXO28Q9NVF7 368 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CYP3A7-CYP3A51PA0A087WV96 503 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 TBX3O15119 743 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 SLC37A4O43826 429 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CELF2O95319 508 aaKnown RBP14.59□□□□□ -0.07
LDB3-203ENST00000372056 TDP2O95551 362 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CYP3A4P08684 503 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CYP3A7P24462 503 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 FANCCQ00597 558 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 CALCRLQ16602 461 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 RRAGBQ5VZM2 374 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 XRRA1Q6P2D8 792 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 IGSF22Q8N9C0 903 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 ENOX1Q8TC92 643 aaKnown RBP14.59□□□□□ -0.07
LDB3-203ENST00000372056 MED15Q96RN5 788 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 ANO3Q9BYT9 981 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 NMRK2Q9NPI5 230 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 FANCLQ9NW38 375 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 IFNKQ9P0W0 207 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 LOC285556D6RIA3 1793 aa14.59□□□□□ -0.07
LDB3-203ENST00000372056 ITGBL1O95965 494 aaPredicted RBP14.58□□□□□ -0.08
LDB3-203ENST00000372056 SREBF1P36956 1147 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 HSD17B4P51659 736 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 CUL4BQ13620 913 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 TMEM266Q2M3C6 531 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 GPBP1L1Q9HC44 474 aaPredicted RBP14.58□□□□□ -0.08
LDB3-203ENST00000372056 ZCCHC17Q9NP64 241 aaKnown RBP14.58□□□□□ -0.08
LDB3-203ENST00000372056 ZNF536O15090 1300 aa14.58□□□□□ -0.08
LDB3-203ENST00000372056 SLC25A27O95847 323 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 ZNF18P17022 549 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CIITAP33076 1130 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
LDB3-203ENST00000372056 INHBEP58166 350 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 USP17L6PQ6QN14 398 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CABP7Q86V35 215 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 SLFN12Q8IYM2 578 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 RASSF8Q8NHQ8 419 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CUEDC2Q9H467 287 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 ZNF408Q9H9D4 720 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 KBTBD4Q9NVX7 518 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 PYCARDQ9ULZ3 195 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 FZD1Q9UP38 647 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 B4DLN1 442 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CFBP00751 764 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 MYL1P05976 194 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 POTEIP0CG38 1075 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 POTEJP0CG39 1038 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 PTPRFP10586 1907 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CD44P16070 742 aaKnown RBP14.57□□□□□ -0.08
LDB3-203ENST00000372056 PLCG1P19174 1290 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 STAT3P40763 770 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 TECP42680 631 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 SNAP25P60880 206 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 PDIA5Q14554 519 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 TRMT44Q8IYL2 757 aaKnown RBP14.57□□□□□ -0.08
LDB3-203ENST00000372056 SMC1BQ8NDV3 1235 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 KIAA1524Q8TCG1 905 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 LRRC15Q8TF66 581 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 WNK4Q96J92 1243 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 CLMNQ96JQ2 1002 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 TRERF1Q96PN7 1200 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 TRPM7Q96QT4 1865 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 MMTAG2Q9BU76 263 aaKnown RBP14.57□□□□□ -0.08
LDB3-203ENST00000372056 MAGEF1Q9HAY2 307 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 NFE2L3Q9Y4A8 694 aa14.57□□□□□ -0.08
LDB3-203ENST00000372056 PARP14Q460N5 1801 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 SPDYE16A6NNV3 312 aaPredicted RBP14.56□□□□□ -0.08
LDB3-203ENST00000372056 PPP1R3GB7ZBB8 358 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 TRAF5O00463 557 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 ALAS1P13196 640 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 TXKP42681 527 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 LRMPQ12912 555 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.56□□□□□ -0.08
LDB3-203ENST00000372056 KCTD17Q8N5Z5 321 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 REPS2Q8NFH8 660 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
LDB3-203ENST00000372056 FAM20AQ96MK3 541 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 MBOAT7Q96N66 472 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 IMPACTQ9P2X3 320 aa14.56□□□□□ -0.08
LDB3-203ENST00000372056 PFASO15067 1338 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 CBFA2T2O43439 604 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 OFD1O75665 1012 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 GCLCP48506 637 aaPredicted RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 ARHGAP4P98171 946 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 Q4G0T1 1027 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 NIPA1Q7RTP0 329 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 ANKRD23Q86SG2 305 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 RIOX2Q8IUF8 465 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 SMYD4Q8IYR2 804 aaPredicted RBP14.55□□□□□ -0.08
LDB3-203ENST00000372056 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
LDB3-203ENST00000372056 CRYGNQ8WXF5 182 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms