RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 TTC19Q6DKK2 380 aaPredicted RBP16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 C2CD5Q86YS7 1000 aa16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 ZFPM1Q8IX07 1006 aa16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 DDX12PQ92771 950 aa16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 ZNHIT6Q9NWK9 470 aaKnown RBP16.84■□□□□ 0.29
SLC39A1-204ENST00000368623 ZBED6P86452 979 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 LRRC31Q6UY01 552 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 FAM163AQ96GL9 167 aaPredicted RBP16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 PSMB7Q99436 277 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 EHD4Q9H223 541 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 MAGEF1Q9HAY2 307 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 USP40Q9NVE5 1235 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 MYO1AQ9UBC5 1043 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 RAB21Q9UL25 225 aa16.83■□□□□ 0.29
SLC39A1-204ENST00000368623 USP17L15C9J2P7 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L13C9JLJ4 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L11C9JVI0 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L18D6R9N7 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L22D6RA61 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L17D6RBQ6 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L19D6RCP7 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L20D6RJB6 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L24Q0WX57 530 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 CENPPQ6IPU0 288 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 USP17L6PQ6QN14 398 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 SERPINB13Q9UIV8 391 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 EIF3CLB5ME19 914 aaKnown RBP16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 PSMD14O00487 310 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 TCP10Q12799 353 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 TMEM266Q2M3C6 531 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 ANKRD13CQ8N6S4 541 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 EIF3CQ99613 913 aaKnown RBP16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 NDST4Q9H3R1 872 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 SAR1BQ9Y6B6 198 aa16.83■□□□□ 0.28
SLC39A1-204ENST00000368623 MYH10P35580 1976 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 MARCH6O60337 910 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 BBOX1O75936 387 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 CYLC1P35663 651 aaPredicted RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 SNAP25P60880 206 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 APBA1Q02410 837 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ZNF543Q08ER8 600 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 TBC1D22AQ8WUA7 517 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 HAS1Q92839 578 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 GJD4Q96KN9 370 aaPredicted RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 TSPYL1Q9H0U9 437 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 MLXIPQ9HAP2 919 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ARHGAP20Q9P2F6 1191 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 NPHP3-ACAD11A0A0J9YXS1 232 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ESYT2A0FGR8 921 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 PDE2AO00408 941 aaPredicted RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 KRT86O43790 486 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 RNF40O75150 1001 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ERLIN1O75477 346 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 SHMT1P34896 483 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 NOVP48745 357 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 NT5C2P49902 561 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 KRT83P78385 493 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ASPRV1Q53RT3 343 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 KRT79Q5XKE5 535 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 UNC13DQ70J99 1090 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 FAM114A1Q8IWE2 563 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 ZSCAN29Q8IWY8 852 aaPredicted RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 SLF2Q8IX21 1173 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 RAD54LQ92698 747 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 CCDC42Q96M95 316 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 JADE2Q9NQC1 790 aa16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 DDX25Q9UHL0 483 aaKnown RBP16.82■□□□□ 0.28
SLC39A1-204ENST00000368623 LY75O60449 1722 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 TTLL1O95922 423 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 NOP2P46087 812 aaKnown RBP16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 FXR2P51116 673 aaKnown RBP eCLIP16.81■□□□□ 0.281e-8■■■■■ 32.1
SLC39A1-204ENST00000368623 VWA3BQ502W6 1294 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 ERGIC2Q96RQ1 377 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 CAPN6Q9Y6Q1 641 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 ADAMTSL1Q8N6G6 1762 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 PPEF1O14829 653 aaPredicted RBP16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 DNAJC21Q5F1R6 531 aaKnown RBP16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 RRAGAQ7L523 313 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 NELFCDQ8IXH7 590 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 SMARCAL1Q9NZC9 954 aa16.81■□□□□ 0.28
SLC39A1-204ENST00000368623 E9PMD0 336 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 POLRMTO00411 1230 aaKnown RBP16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 SNHG28P0DPA3 235 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 MYBL2P10244 700 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 SIK3Q9Y2K2 1263 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 MYH7BA7E2Y1 1941 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 IGKV6D-41A0A0C4DH26 115 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 LRRC53A6NM62 1247 aa16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 EIF4A3P38919 411 aaKnown RBP16.8■□□□□ 0.28
SLC39A1-204ENST00000368623 STAT3P40763 770 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms