RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CD44P16070 742 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 PDE4BQ07343 736 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 TJAP1Q5JTD0 557 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 PSRC1Q6PGN9 363 aaPredicted RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 NFXL1Q6ZNB6 911 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 KCTD1Q719H9 257 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 FBXL16Q8N461 479 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 FAM184AQ8NB25 1140 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 NSUN7Q8NE18 718 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 SYMPKQ92797 1274 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 CHMP4CQ96CF2 233 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 PRDM12Q9H4Q4 367 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 CYP39A1Q9NYL5 469 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 ZSWIM5Q9P217 1185 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 PRR12Q9ULL5 1215 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 MTMR6Q9Y217 621 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 ASB14A6NK59 587 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 DYNC1LI2O43237 492 aaPredicted RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 PRPF40AO75400 957 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 CABYRO75952 493 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 FGRP09769 529 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 ALAS1P13196 640 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 RXRAP19793 462 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 SLC1A4P43007 532 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 ITGA7Q13683 1181 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 FSCN1Q16658 493 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 IQSEC1Q6DN90 963 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 TLK2Q86UE8 772 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 TMEM87BQ96K49 555 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 NOC4LQ9BVI4 516 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 TRPV6Q9H1D0 765 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 ANAPC4Q9UJX5 808 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 YBX2Q9Y2T7 364 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 Q9Y3F1 56 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 B4GALT4O60513 344 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 RANBP6O60518 1105 aaKnown RBP11.49□□□□□ -0.57
TPM3-210ENST00000368530 FGBP02675 491 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 PYGBP11216 843 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 PDCP20941 246 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 PTMSP20962 102 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 EVCP57679 992 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 CCDC174Q6PII3 467 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 FERMT3Q86UX7 667 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 SMARCC2Q8TAQ2 1214 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
TPM3-210ENST00000368530 MYL10Q9BUA6 226 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 HIPK3Q9H422 1215 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 LY9Q9HBG7 655 aa11.49□□□□□ -0.57
TPM3-210ENST00000368530 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 CCL23P55773 120 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 PSMC6P62333 389 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 TTBK2Q6IQ55 1244 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 BTNL9Q6UXG8 535 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 EEPD1Q7L9B9 569 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 MICU3Q86XE3 530 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 FBXO16Q8IX29 292 aaPredicted RBP11.48□□□□□ -0.57
TPM3-210ENST00000368530 UBAC1Q9BSL1 405 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 RANBP17Q9H2T7 1088 aaKnown RBP11.48□□□□□ -0.57
TPM3-210ENST00000368530 GDPD2Q9HCC8 539 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 STX8Q9UNK0 236 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 LRRC37A2A6NM11 1700 aa11.48□□□□□ -0.57
TPM3-210ENST00000368530 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 ERICH2A1L162 156 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 CCDC69A6NI79 296 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 GOLGA8AA7E2F4 631 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 H3BQV1 296 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 CPLX1O14810 134 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 ZBTB43O43298 467 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 ICAM1P05362 532 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 SLC3A2P08195 630 aaKnown RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.57
TPM3-210ENST00000368530 WTAPQ15007 396 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 SART3Q15020 963 aaKnown RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 APOA5Q6Q788 366 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 POTEHQ6S545 545 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 ATXN2LQ8WWM7 1075 aaKnown RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 ESR2Q92731 530 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 GAS2L1Q99501 681 aaPredicted RBP11.47□□□□□ -0.57
TPM3-210ENST00000368530 SEZ6LQ9BYH1 1024 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 AP5M1Q9H0R1 490 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 NKX2-4Q9H2Z4 354 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 VTA1Q9NP79 307 aa11.47□□□□□ -0.57
TPM3-210ENST00000368530 LCTP09848 1927 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 MYH6P13533 1939 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 TSPY2A6NKD2 308 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 TNFRSF10AO00220 468 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 NFIBO00712 420 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 ORC4O43929 436 aa11.46□□□□□ -0.57
TPM3-210ENST00000368530 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.57
TPM3-210ENST00000368530 SLC16A2P36021 539 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms