RNA–Protein interactions for RNA: ENST00000367718.5

TNFSF4-202, Transcript of TNF superfamily member 4, humanhuman

TSL 1 (best) BASIC

Gene TNFSF4, Length 3,429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-202ENST00000367718 QRICH1Q2TAL8 776 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 GPBP1Q86WP2 473 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 ADSSL1Q8N142 457 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 TMX4Q9H1E5 349 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 ZNF277Q9NRM2 450 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 MKRN1Q9UHC7 482 aaKnown RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 STK24Q9Y6E0 443 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 EIF4A3P38919 411 aaKnown RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 USP8P40818 1118 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 EPS15P42566 896 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 POLR2FP61218 127 aaKnown RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 EN1Q05925 392 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 GRB10Q13322 594 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 STIM1Q13586 685 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 RRP1BQ14684 758 aaKnown RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 ZC2HC1CQ53FD0 456 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 CDKAL1Q5VV42 579 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 TMED8Q6PL24 325 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 BARGINQ6ZT62 677 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 SV2BQ7L1I2 683 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 SH3RF1Q7Z6J0 888 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 DGKHQ86XP1 1220 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 TPH2Q8IWU9 490 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 COG1Q8WTW3 980 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 JAKMIP2Q96AA8 810 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 CCDC42Q96M95 316 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 PACSIN1Q9BY11 444 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 DNAJC18Q9H819 358 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 PCDHA12Q9UN75 941 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 FARP1Q9Y4F1 1045 aaPredicted RBP6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 CAPN6Q9Y6Q1 641 aa6.27□□□□□ -1.41
TNFSF4-202ENST00000367718 SHANK3Q9BYB0 1731 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 BCL9LQ86UU0 1499 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 LRRC53A6NM62 1247 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 PDE2AO00408 941 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 IPO7O95373 1038 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 MYBL2P10244 700 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 COPB2P35606 906 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 CRKP46108 304 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 HERVK_113P62684 666 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 GSTO1P78417 241 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 TRADDQ15628 312 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 LONRF2Q1L5Z9 754 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 CCDC93Q567U6 631 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 SLC10A5Q5PT55 438 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 KRT79Q5XKE5 535 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 SLFN13Q68D06 897 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 FOXR1Q6PIV2 292 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 WDR59Q6PJI9 974 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 DEFB132Q7Z7B7 95 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 CCDC148Q8NFR7 591 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 P2RX5Q93086 422 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 PRMT6Q96LA8 375 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 PNMA5Q96PV4 448 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 TRIM31Q9BZY9 425 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 EHD4Q9H223 541 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 NHEJ1Q9H9Q4 299 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 MRFAP1Q9Y605 127 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 VGLL3A8MV65 326 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 POLRMTO00411 1230 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 ERCC5P28715 1186 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 DMTNQ08495 405 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 SMC1AQ14683 1233 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 COG2Q14746 738 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 NBPF9Q3BBW0 867 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 CERKLQ49MI3 558 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 KRT27Q7Z3Y8 459 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 MTERF4Q7Z6M4 381 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 FAM133AQ8N9E0 248 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 ZNF579Q8NAF0 562 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 OR8K1Q8NGG5 319 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 IFT81Q8WYA0 676 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 LARP4BQ92615 738 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 ZNF668Q96K58 619 aaPredicted RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 CSRNP1Q96S65 589 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 FAM107BQ9H098 131 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 PCIF1Q9H4Z3 704 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 ARFGAP3Q9NP61 516 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 BLOC1S4Q9NUP1 217 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 SALL4Q9UJQ4 1053 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 LEMD3Q9Y2U8 911 aa6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 MKI67P46013 3256 aaKnown RBP6.26□□□□□ -1.41
TNFSF4-202ENST00000367718 LAMB4A4D0S4 1761 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 CNTNAP4Q9C0A0 1308 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 RASSF10A6NK89 507 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 BACH1O14867 736 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 ZNF263O14978 683 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 EDIL3O43854 480 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 TBC1D8O95759 1140 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 SHMT1P34896 483 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 LONP1P36776 959 aaKnown RBP6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 ARHGAP25P42331 645 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 NOP2P46087 812 aaKnown RBP6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 CASP4P49662 377 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 GUCY2FP51841 1108 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 SOX10P56693 466 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 ICA1Q05084 483 aa6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 CDC37Q16543 378 aaPredicted RBP6.25□□□□□ -1.41
TNFSF4-202ENST00000367718 KCTD16Q68DU8 428 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms