RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 PLS1Q14651 629 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ASPRV1Q53RT3 343 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 FAM26FQ5R3K3 315 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 FANCBQ8NB91 859 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ENOX1Q8TC92 643 aaKnown RBP9.68□□□□□ -0.86
SYNE1-209ENST00000367257 TMEM206Q9H813 350 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 MRPL47Q9HD33 250 aaKnown RBP9.68□□□□□ -0.86
SYNE1-209ENST00000367257 PALMDQ9NP74 551 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 INTS9Q9NV88 658 aaKnown RBP9.68□□□□□ -0.86
SYNE1-209ENST00000367257 IVNS1ABPQ9Y6Y0 642 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 PTPRMP28827 1452 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ZNF532Q9HCE3 1301 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 SMCO2A6NFE2 343 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ARHGAP42A6NI28 874 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 UFL1O94874 794 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 CUL4AQ13619 759 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
SYNE1-209ENST00000367257 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ORC6Q9Y5N6 252 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 SCINQ9Y6U3 715 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 PYGBP11216 843 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 LRMPQ12912 555 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 BFSP1Q12934 665 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 PLCB4Q15147 1175 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 TEDDM1Q5T9Z0 273 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 ADPGKQ9BRR6 497 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 TRIM56Q9BRZ2 755 aaKnown RBP9.68□□□□□ -0.86
SYNE1-209ENST00000367257 CARD14Q9BXL6 1004 aa9.68□□□□□ -0.86
SYNE1-209ENST00000367257 S100BP04271 92 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 CD19P15391 556 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ATP2B4P23634 1241 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 NSFP46459 744 aaKnown RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PTK2Q05397 1052 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ACTN3Q08043 901 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ADCY2Q08462 1091 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.67□□□□□ -0.864e-7■■■■■ 58.1
SYNE1-209ENST00000367257 COPRSQ9NQ92 184 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PANK4Q9NVE7 773 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 RWDD2AQ9UIY3 292 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 NR1I2O75469 434 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ME3Q16798 604 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 FAM160B1Q5W0V3 765 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 CASC4Q6P4E1 433 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 BZW1Q7L1Q6 419 aaKnown RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 GFM2Q969S9 779 aaKnown RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 MXD3Q9BW11 206 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 TPP2P29144 1249 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ATP1A2P50993 1020 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PRR16Q569H4 304 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 SARM1Q6SZW1 724 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 KIRREL3Q8IZU9 778 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 CFAP61Q8NHU2 1237 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 FGD4Q96M96 766 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 TTC1Q99614 292 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 WDR11Q9BZH6 1224 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 XAB2Q9HCS7 855 aaKnown RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 NRBP2Q9NSY0 501 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ZNF711Q9Y462 761 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ATP7BP35670 1465 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PCCAP05165 728 aaPredicted RBP9.67□□□□□ -0.86
SYNE1-209ENST00000367257 DCAF15Q66K64 600 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 TMTC3Q6ZXV5 915 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PPP1R13BQ96KQ4 1090 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 PHACTR3Q96KR7 559 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 WDR19Q8NEZ3 1342 aa9.67□□□□□ -0.86
SYNE1-209ENST00000367257 ANO9A1A5B4 782 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 MED7O43513 233 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 INHBAP08476 426 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 POLR2MP0CAP2 368 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 TCIRG1Q13488 830 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 PNOCQ13519 176 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 EXOC3L4Q17RC7 722 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 ZNF658Q5TYW1 1059 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 HIBCHQ6NVY1 386 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 CTAGE3PQ8IX95 158 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 CDHR1Q96JP9 859 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 FAM227BQ96M60 508 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 FAM207AQ9NSI2 230 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 KLC4Q9NSK0 619 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 ZBED6P86452 979 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 ARL6IP4Q66PJ3 421 aaKnown RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 ANKRD7Q92527 254 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 ZBTB10Q96DT7 871 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 NT5C1BQ96P26 610 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 PLIN2Q99541 437 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 PCDHA12Q9UN75 941 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 TSC22D4Q9Y3Q8 395 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 DCTN3O75935 186 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 FMNL1O95466 1100 aaPredicted RBP9.66□□□□□ -0.86
SYNE1-209ENST00000367257 TNNI1P19237 187 aa9.66□□□□□ -0.86
SYNE1-209ENST00000367257 LIG4P49917 911 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms