RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SYMPKQ92797 1274 aaKnown RBP17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 SLC13A4Q9UKG4 626 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 SERPINB2P05120 415 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 TTI1O43156 1089 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 MAPK4P31152 587 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 BAIAP2L1Q9UHR4 511 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 HSPD1P10809 573 aaKnown RBP17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 ME3Q16798 604 aa17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 DALRD3Q5D0E6 543 aaKnown RBP17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 LARP4BQ92615 738 aaKnown RBP17.05■□□□□ 0.32
NUCKS1-201ENST00000367142 OPHN1O60890 802 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SH3BGRP55822 239 aaPredicted RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 TFAMQ00059 246 aaKnown RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 MESDQ14696 234 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ANKRD20A4Q4UJ75 823 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ANKRD20A8PQ5CZ79 823 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ANKRD20A2Q5SQ80 823 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ANKRD20A1Q5TYW2 823 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 EVI5O60447 810 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 KRT1P04264 644 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 CMA1P23946 247 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 STAT2P52630 851 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SOX5P35711 763 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SPZ1Q9BXG8 430 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 HAUS4Q9H6D7 363 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 AFPP02771 609 aaKnown RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SLC12A1Q13621 1099 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 DSTYKQ6XUX3 929 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 KCTD1Q719H9 257 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ZNF653Q96CK0 615 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 CCDC124Q96CT7 223 aaKnown RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SLC10A4Q96EP9 437 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 BBOX1O75936 387 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 BMP3P12645 472 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ARL13BQ3SXY8 428 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 RNF217Q8TC41 542 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 NUDCD1Q96RS6 583 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 DHX36Q9H2U1 1008 aaKnown RBP17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 TLK1Q9UKI8 766 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 ITM2BQ9Y287 266 aa17.04■□□□□ 0.32
NUCKS1-201ENST00000367142 GDF11O95390 407 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 MYL3P08590 195 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 SPATA1Q5VX52 437 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 ZBTB33Q86T24 672 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 TSPYL2Q9H2G4 693 aaPredicted RBP17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 RNF219Q5W0B1 726 aaPredicted RBP17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 C7orf31Q8N865 590 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 GNGT1P63211 74 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 WHAMMQ8TF30 809 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 CNOT6LQ96LI5 555 aaKnown RBP17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 FGD4Q96M96 766 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 AK8Q96MA6 479 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 GADD45BO75293 160 aaPredicted RBP17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 DBNDD1Q9H9R9 158 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 ABCF3Q9NUQ8 709 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 ADCY9O60503 1353 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 GOLGA8SH3BPF8 625 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 IL9RQ01113 521 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 PTGDRQ13258 359 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 DNAJC24Q6P3W2 148 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 TTC30AQ86WT1 665 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 TTC25Q96NG3 672 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 EPS15L1Q9UBC2 864 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 PTPN22Q9Y2R2 807 aa17.03■□□□□ 0.32
NUCKS1-201ENST00000367142 POC1B-GALNT4F8VUJ3 575 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 NR2F2P24468 414 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 OR6B2Q6IFH4 312 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 HIP1RO75146 1068 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 DARS2Q6PI48 645 aaKnown RBP17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 SRRM1Q8IYB3 904 aaKnown RBP17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 KCTD6Q8NC69 237 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 GDAP1L1Q96MZ0 367 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 SLITRK6Q9H5Y7 841 aa17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 MRPL47Q9HD33 250 aaKnown RBP17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 SUCLA2Q9P2R7 463 aaPredicted RBP17.02■□□□□ 0.32
NUCKS1-201ENST00000367142 MKRN3Q13064 507 aaKnown RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 PDCD2Q16342 344 aaPredicted RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 EDC3Q96F86 508 aaKnown RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 MMTAG2Q9BU76 263 aaKnown RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 FTOQ9C0B1 505 aaKnown RBP eCLIP17.02■□□□□ 0.315e-14■□□□□ 10.6
NUCKS1-201ENST00000367142 GREM2Q9H772 168 aa17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 CIAO1O76071 339 aa17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 LRRC24Q50LG9 513 aa17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 FAM160B2Q86V87 743 aa17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 SPATS2Q86XZ4 545 aaKnown RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 RPF1Q9H9Y2 349 aaKnown RBP17.02■□□□□ 0.31
NUCKS1-201ENST00000367142 APBA1Q02410 837 aa17.01■□□□□ 0.31
NUCKS1-201ENST00000367142 MTERF2Q49AM1 385 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms