RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 TAAR1Q96RJ0 339 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 TGS1Q96RS0 853 aaKnown RBP13.42□□□□□ -0.26
MRPL55-212ENST00000366739 RAD9AQ99638 391 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 UBE2ZQ9H832 354 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-212ENST00000366739 HELLSQ9NRZ9 838 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 COL20A1Q9P218 1284 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 HDAC6Q9UBN7 1215 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 GTF2IRD1Q9UHL9 959 aa13.42□□□□□ -0.26
MRPL55-212ENST00000366739 BRWD1Q9NSI6 2320 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 A0A0D9SFI3 127 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 ABHD14A-ACY1A0A1B0GW23 586 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 PI4K2BG5E9Z4 385 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 CASTP20810 708 aaKnown RBP13.41□□□□□ -0.26
MRPL55-212ENST00000366739 TRAF7Q6Q0C0 670 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 SYTL5Q8TDW5 730 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-212ENST00000366739 WNT8BQ93098 351 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 EVI5LQ96CN4 794 aa13.41□□□□□ -0.26
MRPL55-212ENST00000366739 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-212ENST00000366739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 PARNO95453 639 aaKnown RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 HSPD1P10809 573 aaKnown RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 KCNA5P22460 613 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 PSEN2P49810 448 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 MBTPS1Q14703 1052 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 CDC37Q16543 378 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 DGKDQ16760 1214 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 ZNF589Q86UQ0 364 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 TBC1D10CQ8IV04 446 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 C7orf31Q8N865 590 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
MRPL55-212ENST00000366739 TTC14Q96N46 770 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 ALG1Q9BT22 464 aa13.4□□□□□ -0.26
MRPL55-212ENST00000366739 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-212ENST00000366739 IKBKEQ14164 716 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 MFSD10Q14728 455 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 STXBP2Q15833 593 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 MCMDC2Q4G0Z9 681 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 GPATCH4Q5T3I0 446 aaKnown RBP13.39□□□□□ -0.27
MRPL55-212ENST00000366739 ZNF618Q5T7W0 954 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
MRPL55-212ENST00000366739 MFSD6Q6ZSS7 791 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 GJD3Q8N144 294 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-212ENST00000366739 CRBNQ96SW2 442 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 RMDN3Q96TC7 470 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 ZKSCAN3Q9BRR0 538 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 C17orf80Q9BSJ5 609 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 DDX41Q9UJV9 622 aaKnown RBP13.39□□□□□ -0.27
MRPL55-212ENST00000366739 ABCB11O95342 1321 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 ZMYM6O95789 1325 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 NEDD4P46934 1319 aa13.39□□□□□ -0.27
MRPL55-212ENST00000366739 HAS3O00219 553 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 EFCAB14O75071 495 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 F2P00734 622 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 IL9P15248 144 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 EIF2AK2P19525 551 aaKnown RBP13.38□□□□□ -0.27
MRPL55-212ENST00000366739 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-212ENST00000366739 PTK7Q13308 1070 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 HIC1Q14526 733 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 KIAA0753Q2KHM9 967 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 EMID1Q96A84 441 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-212ENST00000366739 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
MRPL55-212ENST00000366739 MUC6Q6W4X9 2439 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 SORBS3O60504 671 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 LGR5O75473 907 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 SSTR3P32745 418 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-212ENST00000366739 LAMC2Q13753 1193 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 ANKRD45Q5TZF3 282 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 PTCRAQ6ISU1 281 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-212ENST00000366739 ADGRF4Q8IZF3 695 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 PPTC7Q8NI37 304 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 MAF1Q9H063 256 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 MRVI1Q9Y6F6 885 aa13.37□□□□□ -0.27
MRPL55-212ENST00000366739 SIP14410 1827 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 PRR33A8MZF0 331 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 EIF3JO75822 258 aaKnown RBP13.36□□□□□ -0.27
MRPL55-212ENST00000366739 NR3C2P08235 984 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
MRPL55-212ENST00000366739 PDE1AP54750 535 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
MRPL55-212ENST00000366739 QRICH1Q2TAL8 776 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 DGKHQ86XP1 1220 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 MYOCDQ8IZQ8 938 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 DBF4BQ8NFT6 615 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 ESR2Q92731 530 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 PXMP2Q9NR77 195 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
MRPL55-212ENST00000366739 INSL6Q9Y581 213 aa13.36□□□□□ -0.27
MRPL55-212ENST00000366739 CCDC171Q6TFL3 1326 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms