RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CCDC50Q8IVM0 306 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 ZNF654Q8IZM8 581 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 NHEJ1Q9H9Q4 299 aaPredicted RBP21.1■□□□□ 0.97
CMTM3-201ENST00000361909 RNF14Q9UBS8 474 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 LAMB1P07942 1786 aa21.1■□□□□ 0.97
CMTM3-201ENST00000361909 DPEP1P16444 411 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 KCNB1Q14721 858 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 TTC38Q5R3I4 469 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 STRIP1Q5VSL9 837 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ADSSL1Q8N142 457 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ALS2CR12Q96Q35 445 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 EHD4Q9H223 541 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ACTR5Q9H9F9 607 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-201ENST00000361909 TSKSQ9UJT2 592 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ZBTB7AO95365 584 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 BTDP43251 543 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 PREPLQ4J6C6 727 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-201ENST00000361909 IRF2BP1Q8IU81 584 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 SH3RF3Q8TEJ3 882 aaPredicted RBP21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ESR2Q92731 530 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 RRP36Q96EU6 259 aaKnown RBP21.09■□□□□ 0.97
CMTM3-201ENST00000361909 PSMD1Q99460 953 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 LACRTQ9GZZ8 138 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 INCENPQ9NQS7 918 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 EXOC1Q9NV70 894 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 SAMM50Q9Y512 469 aa21.09■□□□□ 0.97
CMTM3-201ENST00000361909 ZNF185O15231 689 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 LSP1P33241 339 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 ACTN3Q08043 901 aaPredicted RBP21.08■□□□□ 0.97
CMTM3-201ENST00000361909 PDCLQ13371 301 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 NAA35Q5VZE5 725 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 UPF1Q92900 1129 aaKnown RBP eCLIP21.08■□□□□ 0.974e-7■■■■■ 29.7
CMTM3-201ENST00000361909 MRIQ9BWK5 157 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 VPS33BQ9H267 617 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 SUFUQ9UMX1 484 aa21.08■□□□□ 0.97
CMTM3-201ENST00000361909 PRPF3O43395 683 aaKnown RBP21.07■□□□□ 0.96
CMTM3-201ENST00000361909 SOGA3Q5TF21 947 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 FAM114A1Q8IWE2 563 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 IFT20Q8IY31 132 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 CERS5Q8N5B7 392 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 LRRC1Q9BTT6 524 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 VPS54Q9P1Q0 977 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 ZNF219Q9P2Y4 722 aaPredicted RBP21.07■□□□□ 0.96
CMTM3-201ENST00000361909 ORC4O43929 436 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 ECE2O60344 883 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 PPP1R37O75864 691 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 TRIM21P19474 475 aaKnown RBP21.07■□□□□ 0.96
CMTM3-201ENST00000361909 PRCPP42785 496 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 PAFAH1B1P43034 410 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 CCDC181Q5TID7 509 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 ARL8AQ96BM9 186 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 SH2D4AQ9H788 454 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 DBNDD1Q9H9R9 158 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 DMGDHQ9UI17 866 aaKnown RBP21.07■□□□□ 0.96
CMTM3-201ENST00000361909 MCM8Q9UJA3 840 aa21.07■□□□□ 0.96
CMTM3-201ENST00000361909 GOLGA6L7A0A1B0GV03 622 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 HMGB1P1B2RPK0 211 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 PSMA7O14818 248 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 PPP1R2P41236 205 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 PAK2Q13177 524 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 ARL6IP4Q66PJ3 421 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 HAUS3Q68CZ6 603 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 C8orf74Q6P047 294 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 TAX1BP1Q86VP1 789 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 MAGEC3Q8TD91 643 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 TNFRSF25Q93038 417 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 BLZF1Q9H2G9 400 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 RBM28Q9NW13 759 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 MCM9Q9NXL9 1143 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 RCCD1A6NED2 376 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 HNRNPH3P31942 346 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 LONP1P36776 959 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 PTGISQ16647 500 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 CFAP58Q5T655 872 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 WLSQ5T9L3 541 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 HHIPL2Q6UWX4 724 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 ARFGAP2Q8N6H7 521 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 TSEN2Q8NCE0 465 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 ZNF473Q8WTR7 871 aaKnown RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 ZIM3Q96PE6 472 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 OSBPL9Q96SU4 736 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 JPH2Q9BR39 696 aaPredicted RBP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.06■□□□□ 0.96
CMTM3-201ENST00000361909 CDK5RAP2Q96SN8 1893 aa21.06■□□□□ 0.96
CMTM3-201ENST00000361909 MYO1FO00160 1098 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 RHBDL3P58872 404 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 RRP12Q5JTH9 1297 aaKnown RBP21.05■□□□□ 0.96
CMTM3-201ENST00000361909 C12orf60Q5U649 245 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 IQCKQ8N0W5 287 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 BANK1Q8NDB2 785 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-201ENST00000361909 KLC4Q9NSK0 619 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 ATF5Q9Y2D1 282 aaPredicted RBP21.05■□□□□ 0.96
CMTM3-201ENST00000361909 DAGLAQ9Y4D2 1042 aa21.05■□□□□ 0.96
CMTM3-201ENST00000361909 USP17L3A6NCW0 530 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 USP17L4A6NCW7 530 aa21.04■□□□□ 0.96
CMTM3-201ENST00000361909 RASSF9O75901 435 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms