RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
VAMP1-201ENST00000361716 PDE4DQ08499 809 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 KIF2BQ8N4N8 673 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 FAM237AA0A1B0GTK4 181 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 LGALS16A8MUM7 142 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 TOM1O60784 492 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 ATP6V1G2O95670 118 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 PCCAP05165 728 aaPredicted RBP13.98□□□□□ -0.17
VAMP1-201ENST00000361716 KIF11P52732 1056 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 PSMD2Q13200 908 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
VAMP1-201ENST00000361716 NLRP10Q86W26 655 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 MGARPQ8TDB4 240 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 CASKIN2Q8WXE0 1202 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 DCCP43146 1447 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
VAMP1-201ENST00000361716 ANO9A1A5B4 782 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 RBBP5Q15291 538 aaKnown RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 DYDC1Q8WWB3 177 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 CDK5RAP3Q96JB5 506 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 ELAC2Q9BQ52 826 aaKnown RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 TBC1D7Q9P0N9 293 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 CAPN11Q9UMQ6 739 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 TACC3Q9Y6A5 838 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 XDHP47989 1333 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 WDR17Q8IZU2 1322 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 CAND2O75155 1236 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 LIFRP42702 1097 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 DTHD1Q6ZMT9 781 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 TMTC2Q8N394 836 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 ZNF483Q8TF39 744 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 CUL5Q93034 780 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 LBHD1Q9BQE6 289 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 MKNK2Q9HBH9 465 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 SLC39A2Q9NP94 309 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 N4BP2Q86UW6 1770 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 HMGB1P1B2RPK0 211 aaPredicted RBP13.97□□□□□ -0.17
VAMP1-201ENST00000361716 CEP104O60308 925 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 WLSQ5T9L3 541 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 ANKS4BQ8N8V4 417 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 RAPGEF5Q92565 580 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 ATP6V0A4Q9HBG4 840 aa13.97□□□□□ -0.17
VAMP1-201ENST00000361716 DCDC2CA8MYV0 355 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 H7C1D1 291 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 DNM2P50570 870 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 PRPF4BQ13523 1007 aaKnown RBP13.96□□□□□ -0.17
VAMP1-201ENST00000361716 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 DNAAF5Q86Y56 855 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 NOX5Q96PH1 765 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 ZSCAN10Q96SZ4 725 aaPredicted RBP13.96□□□□□ -0.17
VAMP1-201ENST00000361716 SH3GL3Q99963 347 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 KCNK3O14649 394 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 SEMA3EO15041 775 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 PDHA1P08559 390 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 CYP2D6P10635 497 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 ENAHQ8N8S7 591 aaPredicted RBP13.96□□□□□ -0.17
VAMP1-201ENST00000361716 CNOT6LQ96LI5 555 aaKnown RBP13.96□□□□□ -0.17
VAMP1-201ENST00000361716 MCM9Q9NXL9 1143 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 RFX7Q2KHR2 1363 aa13.96□□□□□ -0.17
VAMP1-201ENST00000361716 ZNF263O14978 683 aa13.96□□□□□ -0.18
VAMP1-201ENST00000361716 SMIM24O75264 130 aa13.96□□□□□ -0.18
VAMP1-201ENST00000361716 MRPL12P52815 198 aaKnown RBP13.96□□□□□ -0.18
VAMP1-201ENST00000361716 ELF3P78545 371 aaPredicted RBP13.96□□□□□ -0.18
VAMP1-201ENST00000361716 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.18
VAMP1-201ENST00000361716 RMND1Q9NWS8 449 aa13.96□□□□□ -0.18
VAMP1-201ENST00000361716 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SGMS1Q86VZ5 419 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 NIP7Q9Y221 180 aaKnown RBP eCLIP13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
VAMP1-201ENST00000361716 RAD51CO43502 376 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 PALMO75781 387 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SLC1A4P43007 532 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 ZBED6P86452 979 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SEMA3FQ13275 785 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
VAMP1-201ENST00000361716 LRRC41Q15345 812 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 IQCKQ8N0W5 287 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 DNAJC7Q99615 494 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 TRPC6Q9Y210 931 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 EPB41P11171 864 aaKnown RBP13.95□□□□□ -0.18
VAMP1-201ENST00000361716 EPS15P42566 896 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SLCO1A2P46721 670 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 SAMD15Q9P1V8 674 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 ATP8A1Q9Y2Q0 1164 aa13.95□□□□□ -0.18
VAMP1-201ENST00000361716 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 EVI5O60447 810 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 PDE8AO60658 829 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 NBPF9Q3BBW0 867 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
VAMP1-201ENST00000361716 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 ISCA1Q9BUE6 129 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 NUP58Q9BVL2 599 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
VAMP1-201ENST00000361716 MLXIPLQ9NP71 852 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms