RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 CCNYQ8ND76 341 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 SDCCAG3Q96C92 435 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 MOSPD1Q9UJG1 213 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 ZNF18P17022 549 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 U2AF2P26368 475 aaKnown RBP eCLIP11.91□□□□□ -0.51e-6■■■■□ 26
CLIP1-203ENST00000361654 GBP1P32455 592 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 TSPY1Q01534 308 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 STXBP2Q15833 593 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 IL17REQ8NFR9 667 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 COPRSQ9NQ92 184 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 ZBTB7AO95365 584 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 RASSF2P50749 326 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 ZNF445P59923 1031 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 MORC3Q14149 939 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 ARHGEF25Q86VW2 580 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 MICALL1Q8N3F8 863 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 SLF1Q9BQI6 1058 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 MMTAG2Q9BU76 263 aaKnown RBP11.91□□□□□ -0.5
CLIP1-203ENST00000361654 VGLL3A8MV65 326 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 BNIP3LO60238 219 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 HOXA7P31268 230 aaPredicted RBP11.91□□□□□ -0.5
CLIP1-203ENST00000361654 PDE1BQ01064 536 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 TNFAIP2Q03169 654 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 THOC5Q13769 683 aaKnown RBP11.91□□□□□ -0.5
CLIP1-203ENST00000361654 TMED8Q6PL24 325 aaPredicted RBP11.91□□□□□ -0.5
CLIP1-203ENST00000361654 SSH3Q8TE77 659 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 TSC1Q92574 1164 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 PCDHA4Q9UN74 947 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 PLEKHG1Q9ULL1 1385 aa11.91□□□□□ -0.5
CLIP1-203ENST00000361654 KCNA4P22459 653 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 STX2P32856 288 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 CDR2Q01850 454 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 PPFIA1Q13136 1202 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 TBC1D10BQ4KMP7 808 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-203ENST00000361654 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 KIF3CO14782 793 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 CLGNO14967 610 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 FGAP02671 866 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 ATF2P15336 505 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 KCNJ6P48051 423 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 PALD1Q9ULE6 856 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 USP17L5A8MUK1 530 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 NEMP1O14524 444 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 AFAP1L1Q8TED9 768 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 SLC13A4Q9UKG4 626 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 HSPA8P11142 646 aaKnown RBP11.9□□□□□ -0.5
CLIP1-203ENST00000361654 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 ZMYM4Q5VZL5 1548 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 C17orf53Q8N3J3 647 aaPredicted RBP11.9□□□□□ -0.5
CLIP1-203ENST00000361654 CEP120Q8N960 986 aa11.9□□□□□ -0.5
CLIP1-203ENST00000361654 LARP4BQ92615 738 aaKnown RBP11.9□□□□□ -0.5
CLIP1-203ENST00000361654 NXF1Q9UBU9 619 aaKnown RBP11.9□□□□□ -0.5
CLIP1-203ENST00000361654 KIAA0556O60303 1618 aa11.9□□□□□ -0.51
CLIP1-203ENST00000361654 KRIT1O00522 736 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 RGS16O15492 202 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 JAK3P52333 1124 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 POLR2FP61218 127 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 PODNQ7Z5L7 613 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 CMTR1Q8N1G2 835 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 WRNIP1Q96S55 665 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 HOMER3Q9NSC5 361 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 ATG3Q9NT62 314 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 ZHX2Q9Y6X8 837 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 LDHAP00338 332 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 DBN1Q16643 649 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 RNF26Q9BY78 433 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 MRPL47Q9HD33 250 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 SLC39A2Q9NP94 309 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 KCNQ3O43525 872 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 ACTN1P12814 892 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 STX1BP61266 288 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 TTLL4Q14679 1199 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 RAPH1Q70E73 1250 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 MCUQ8NE86 351 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 SLC4A1P02730 911 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 YWHAGP61981 247 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 OR6B2Q6IFH4 312 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 BZW1Q7L1Q6 419 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 FAM186BQ8IYM0 893 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 OTUD7AQ8TE49 926 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 K7ERI5 159 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 KCNK3O14649 394 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 PFKFB2O60825 505 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 PHKA2P46019 1235 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 TWF2Q6IBS0 349 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 LMNTD2Q8IXW0 634 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 RSRC1Q96IZ7 334 aaKnown RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 ZFP91Q96JP5 570 aaPredicted RBP11.89□□□□□ -0.51
CLIP1-203ENST00000361654 NLRP4Q96MN2 994 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 INPP5FQ9Y2H2 1132 aa11.89□□□□□ -0.51
CLIP1-203ENST00000361654 NDUFAB1O14561 156 aa11.88□□□□□ -0.51
CLIP1-203ENST00000361654 SRGAP2CP0DJJ0 459 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms