RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 RBM43Q6ZSC3 357 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 PYM1Q9BRP8 204 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 MAP3K20Q9NYL2 800 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 DDX25Q9UHL0 483 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 SLC45A1Q9Y2W3 748 aa15.67■□□□□ 0.1
PDLIM5-203ENST00000359265 CCL15-CCL14A0A0B4J2E2 113 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 ATP2A1O14983 1001 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 HSD17B4P51659 736 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 GHRHRQ02643 423 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 CCL15Q16663 113 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 TMEM266Q2M3C6 531 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 TKFCQ3LXA3 575 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 FCHSD1Q86WN1 690 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 REPS2Q8NFH8 660 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 GTF3C2Q8WUA4 911 aaPredicted RBP15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 CCDC34Q96HJ3 373 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 AK8Q96MA6 479 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 SDF4Q9BRK5 362 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 TSPY26PQ9H489 355 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 RABGAP1Q9Y3P9 1069 aa15.66■□□□□ 0.1
PDLIM5-203ENST00000359265 LCTP09848 1927 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 FSD2A1L4K1 749 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 MANSC4A6NHS7 340 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 SLC37A4O43826 429 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 MOGSQ13724 837 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 LBX2Q6XYB7 198 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 ANKRD23Q86SG2 305 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 CRYGNQ8WXF5 182 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 CLEC4DQ8WXI8 215 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 SYMPKQ92797 1274 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 ASCC2Q9H1I8 757 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 RNF146Q9NTX7 359 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 HOOK1Q9UJC3 728 aaKnown RBP15.65■□□□□ 0.1
PDLIM5-203ENST00000359265 CYP3A7-CYP3A51PA0A087WV96 503 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 NFIBO00712 420 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 EDIL3O43854 480 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 MARCH6O60337 910 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 CYP3A4P08684 503 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 CCDC192P0DO97 292 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 CYP3A7P24462 503 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 IL17AQ16552 155 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 SNRNP48Q6IEG0 339 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 GPAT2Q6NUI2 795 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 KRBA2Q6ZNG9 492 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 CNNM3Q8NE01 707 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 LRCH3Q96II8 777 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 P2RX7Q99572 595 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 TEX13BQ9BXU2 312 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 RAB34Q9BZG1 259 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 MAF1Q9H063 256 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 HOMER2Q9NSB8 354 aa15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 ZNF214Q9UL59 606 aaPredicted RBP15.64■□□□□ 0.09
PDLIM5-203ENST00000359265 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 CIITAP33076 1130 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 ZNF76P36508 570 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 FXR2P51116 673 aaKnown RBP eCLIP15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 KANK3Q6NY19 840 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 SASS6Q6UVJ0 657 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 USP49Q70CQ1 688 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 GAS2L3Q86XJ1 694 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 CKAP2LQ8IYA6 745 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 ELOA2Q8IYF1 753 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 CD99L2Q8TCZ2 262 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 TBC1D5Q92609 795 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 EPSTI1Q96J88 318 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 ZNF333Q96JL9 665 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 MTMR9Q96QG7 549 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 TMEM106CQ9BVX2 250 aa15.63■□□□□ 0.09
PDLIM5-203ENST00000359265 TBX3O15119 743 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 TXKP42681 527 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 INHBEP58166 350 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 HERVK_113P62684 666 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 PLS1Q14651 629 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 TMEM132BQ14DG7 1078 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 Q4G0T1 1027 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 SLFN12Q8IYM2 578 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 PDILTQ8N807 584 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 BRI3BPQ8WY22 251 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 CCSER1Q9C0I3 900 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 ACAD9Q9H845 621 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 ZCCHC17Q9NP64 241 aaKnown RBP15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 CCDC39Q9UFE4 941 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 KIAA1217Q5T5P2 1943 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 RPTORQ8N122 1335 aa15.62■□□□□ 0.09
PDLIM5-203ENST00000359265 LOXHD1Q8IVV2 1947 aa15.61■□□□□ 0.09
PDLIM5-203ENST00000359265 TESPA1A2RU30 521 aaPredicted RBP15.61■□□□□ 0.09
PDLIM5-203ENST00000359265 BTBD19C9JJ37 291 aa15.61■□□□□ 0.09
PDLIM5-203ENST00000359265 PDHXO00330 501 aa15.61■□□□□ 0.09
PDLIM5-203ENST00000359265 COPB2P35606 906 aa15.61■□□□□ 0.09
PDLIM5-203ENST00000359265 STAT3P40763 770 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms